Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.36□□□□□ -0.43
CCDC107Q8WV48 ENPP7P14-201ENST00000621765 1040 ntBASIC12.36□□□□□ -0.43
CCDC107Q8WV48 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCDC107Q8WV48 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 AC012441.1-201ENST00000446669 685 ntBASIC12.35□□□□□ -0.43
CCDC107Q8WV48 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 AC010319.3-201ENST00000597028 470 ntBASIC12.35□□□□□ -0.43
CCDC107Q8WV48 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 AC131902.2-201ENST00000566892 2172 ntBASIC12.35□□□□□ -0.43
CCDC107Q8WV48 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCDC107Q8WV48 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CCDC107Q8WV48 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms