Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 AC106760.1-201ENST00000508690 800 ntBASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 GNRHR2-203ENST00000581100 1187 ntBASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 AC027307.3-201ENST00000594262 1100 ntBASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.56□□□□□ -0.4
DNAAF1Q8NEP3 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 FAM8A4P-201ENST00000435433 1213 ntBASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 AC104506.1-201ENST00000609247 429 ntBASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 AC002472.3-201ENST00000640124 621 ntBASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DNAAF1Q8NEP3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.54□□□□□ -0.4
DNAAF1Q8NEP3 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DNAAF1Q8NEP3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.54□□□□□ -0.4
DNAAF1Q8NEP3 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.54□□□□□ -0.4
DNAAF1Q8NEP3 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
DNAAF1Q8NEP3 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DNAAF1Q8NEP3 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DNAAF1Q8NEP3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.54□□□□□ -0.4
DNAAF1Q8NEP3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.54□□□□□ -0.4
DNAAF1Q8NEP3 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms