Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 WASH4P-201ENST00000564273 1246 ntBASIC14.72□□□□□ -0.05
CCDC25Q86WR0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 AL139385.1-201ENST00000611744 3272 ntBASIC14.72□□□□□ -0.05
CCDC25Q86WR0 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC25Q86WR0 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 INE1-201ENST00000456273 945 ntBASIC14.71□□□□□ -0.05
CCDC25Q86WR0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 RNA5SP421-201ENST00000516864 134 ntBASIC14.71□□□□□ -0.05
CCDC25Q86WR0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 AL033527.5-201ENST00000641382 801 ntBASIC14.71□□□□□ -0.05
CCDC25Q86WR0 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC25Q86WR0 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC25Q86WR0 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC25Q86WR0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC25Q86WR0 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.71□□□□□ -0.06
CCDC25Q86WR0 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC25Q86WR0 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC25Q86WR0 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC25Q86WR0 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC25Q86WR0 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms