Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 NUP210P1-202ENST00000504322 710 ntBASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 AC242376.1-201ENST00000559033 726 ntBASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 RN7SL574P-201ENST00000581512 297 ntBASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 AF254983.2-201ENST00000612331 135 ntBASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 AC004554.1-201ENST00000422830 1468 ntBASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PRICKLE4Q2TBC4 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 MARK2P16-201ENST00000605714 1723 ntBASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 AC093462.1-201ENST00000621167 1683 ntBASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 AL353770.1-201ENST00000614915 403 ntBASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 AC138627.1-207ENST00000641560 1006 ntBASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PRICKLE4Q2TBC4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms