Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP7AQ04656 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP7AQ04656 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP7AQ04656 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATP7AQ04656 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP7AQ04656 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP7AQ04656 AC020763.3-201ENST00000625095 2904 ntBASIC20.23■□□□□ 0.83
ATP7AQ04656 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP7AQ04656 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP7AQ04656 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP7AQ04656 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ATP7AQ04656 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP7AQ04656 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP7AQ04656 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP7AQ04656 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP7AQ04656 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP7AQ04656 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP7AQ04656 PMF1-201ENST00000368273 884 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP7AQ04656 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP7AQ04656 AC103724.2-201ENST00000520355 476 ntBASIC20.22■□□□□ 0.83
ATP7AQ04656 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC20.22■□□□□ 0.83
ATP7AQ04656 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP7AQ04656 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC20.22■□□□□ 0.83
ATP7AQ04656 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP7AQ04656 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP7AQ04656 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ATP7AQ04656 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP7AQ04656 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP7AQ04656 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP7AQ04656 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
ATP7AQ04656 AC015813.5-201ENST00000624641 1514 ntBASIC20.22■□□□□ 0.83
ATP7AQ04656 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ATP7AQ04656 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP7AQ04656 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP7AQ04656 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ATP7AQ04656 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ATP7AQ04656 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP7AQ04656 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATP7AQ04656 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP7AQ04656 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP7AQ04656 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP7AQ04656 AC026271.1-201ENST00000447794 1348 ntBASIC20.22■□□□□ 0.83
ATP7AQ04656 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ATP7AQ04656 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP7AQ04656 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP7AQ04656 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP7AQ04656 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP7AQ04656 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP7AQ04656 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP7AQ04656 AC105443.1-201ENST00000433754 712 ntBASIC20.22■□□□□ 0.83
ATP7AQ04656 DDX11L8-201ENST00000535849 366 ntBASIC20.22■□□□□ 0.83
ATP7AQ04656 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ATP7AQ04656 ABCD1P3-201ENST00000562927 605 ntBASIC20.22■□□□□ 0.83
ATP7AQ04656 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC20.22■□□□□ 0.83
ATP7AQ04656 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC20.22■□□□□ 0.83
ATP7AQ04656 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP7AQ04656 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP7AQ04656 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP7AQ04656 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP7AQ04656 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP7AQ04656 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP7AQ04656 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
ATP7AQ04656 BANP-201ENST00000286122 2368 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP7AQ04656 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP7AQ04656 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP7AQ04656 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP7AQ04656 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP7AQ04656 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP7AQ04656 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP7AQ04656 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
ATP7AQ04656 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ATP7AQ04656 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP7AQ04656 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP7AQ04656 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP7AQ04656 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP7AQ04656 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP7AQ04656 CXXC1P1-202ENST00000489409 1212 ntBASIC20.21■□□□□ 0.83
ATP7AQ04656 RN7SL646P-201ENST00000492969 297 ntBASIC20.21■□□□□ 0.83
ATP7AQ04656 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP7AQ04656 MYL6-215ENST00000549566 685 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP7AQ04656 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP7AQ04656 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC20.21■□□□□ 0.83
ATP7AQ04656 ACTBP9-201ENST00000587663 1099 ntBASIC20.21■□□□□ 0.83
ATP7AQ04656 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP7AQ04656 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ATP7AQ04656 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP7AQ04656 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP7AQ04656 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP7AQ04656 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ATP7AQ04656 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP7AQ04656 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP7AQ04656 MKRN7P-201ENST00000433469 1371 ntBASIC20.2■□□□□ 0.82
ATP7AQ04656 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP7AQ04656 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP7AQ04656 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP7AQ04656 TCAM1P-207ENST00000485295 1537 ntBASIC20.2■□□□□ 0.82
ATP7AQ04656 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP7AQ04656 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
ATP7AQ04656 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP7AQ04656 SNORA50C-201ENST00000408535 133 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms