Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.34□□□□□ -0.27
CHMP24386 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CHMP24386 AC132192.2-201ENST00000596206 1147 ntBASIC13.34□□□□□ -0.27
CHMP24386 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.34□□□□□ -0.27
CHMP24386 AC244093.1-201ENST00000610837 814 ntBASIC13.34□□□□□ -0.27
CHMP24386 AL162426.1-201ENST00000624141 743 ntBASIC13.34□□□□□ -0.27
CHMP24386 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.34□□□□□ -0.27
CHMP24386 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CHMP24386 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP24386 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.34□□□□□ -0.27
CHMP24386 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.34□□□□□ -0.27
CHMP24386 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CHMP24386 AL133338.1-201ENST00000565695 1517 ntBASIC13.34□□□□□ -0.27
CHMP24386 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHMP24386 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
CHMP24386 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.33□□□□□ -0.27
CHMP24386 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.33□□□□□ -0.27
CHMP24386 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CHMP24386 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CHMP24386 BEND3P3-201ENST00000611030 2440 ntBASIC13.33□□□□□ -0.27
CHMP24386 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CHMP24386 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHMP24386 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
CHMP24386 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.33□□□□□ -0.28
CHMP24386 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.33□□□□□ -0.28
CHMP24386 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.33□□□□□ -0.28
CHMP24386 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.33□□□□□ -0.28
CHMP24386 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CHMP24386 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.33□□□□□ -0.28
CHMP24386 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.33□□□□□ -0.28
CHMP24386 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.33□□□□□ -0.28
CHMP24386 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.33□□□□□ -0.28
CHMP24386 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.33□□□□□ -0.28
CHMP24386 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.33□□□□□ -0.28
CHMP24386 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.33□□□□□ -0.28
CHMP24386 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CHMP24386 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.33□□□□□ -0.28
CHMP24386 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.33□□□□□ -0.28
CHMP24386 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.33□□□□□ -0.28
CHMP24386 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.33□□□□□ -0.28
CHMP24386 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHMP24386 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHMP24386 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHMP24386 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHMP24386 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CHMP24386 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CHMP24386 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.33□□□□□ -0.28
CHMP24386 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CHMP24386 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 AL022313.4-201ENST00000562756 2046 ntBASIC13.32□□□□□ -0.28
CHMP24386 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CHMP24386 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 E2F3P2-201ENST00000447755 1422 ntBASIC13.32□□□□□ -0.28
CHMP24386 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.32□□□□□ -0.28
CHMP24386 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.32□□□□□ -0.28
CHMP24386 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms