Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRBV12-3P01733 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TRBV12-3P01733 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 AC023794.5-201ENST00000564380 2157 ntBASIC10.96□□□□□ -0.65
TRBV12-3P01733 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 AL133338.1-201ENST00000565695 1517 ntBASIC10.96□□□□□ -0.65
TRBV12-3P01733 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 AL590824.1-201ENST00000403828 1349 ntBASIC10.96□□□□□ -0.65
TRBV12-3P01733 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 ELK2AP-201ENST00000392510 1007 ntBASIC10.96□□□□□ -0.65
TRBV12-3P01733 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 NME6-203ENST00000415644 849 ntTSL 2 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 BCYRN1-201ENST00000418539 200 ntBASIC10.96□□□□□ -0.65
TRBV12-3P01733 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 AC116345.2-201ENST00000512837 523 ntBASIC10.96□□□□□ -0.65
TRBV12-3P01733 POU5F1P2-201ENST00000521750 823 ntBASIC10.96□□□□□ -0.65
TRBV12-3P01733 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 KRT8P1-201ENST00000557533 1207 ntBASIC10.96□□□□□ -0.65
TRBV12-3P01733 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRBV12-3P01733 HPN-206ENST00000597419 1212 ntTSL 5 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC10.96□□□□□ -0.65
TRBV12-3P01733 AC138627.1-207ENST00000641560 1006 ntBASIC10.96□□□□□ -0.65
TRBV12-3P01733 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRBV12-3P01733 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRBV12-3P01733 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRBV12-3P01733 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRBV12-3P01733 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRBV12-3P01733 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRBV12-3P01733 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRBV12-3P01733 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
TRBV12-3P01733 AC068760.1-201ENST00000493579 1953 ntBASIC10.96□□□□□ -0.66
TRBV12-3P01733 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC10.96□□□□□ -0.66
TRBV12-3P01733 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 STK3-218ENST00000617590 2485 ntTSL 5 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 319.7 ms