Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 AC079112.1-201ENST00000454972 939 ntBASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA3F8WFD2 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA3F8WFD2 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA3F8WFD2 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA3F8WFD2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA3F8WFD2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.96□□□□□ -0.34
NPIPA3F8WFD2 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA3F8WFD2 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
NPIPA3F8WFD2 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA3F8WFD2 HSPA7-201ENST00000445535 1927 ntBASIC12.96□□□□□ -0.34
NPIPA3F8WFD2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
NPIPA3F8WFD2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
NPIPA3F8WFD2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 MIR557-201ENST00000385239 98 ntBASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 AC253536.4-201ENST00000440539 267 ntBASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 PARP8-206ENST00000503665 572 ntTSL 4 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 AC114947.1-202ENST00000514136 344 ntBASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 AC140658.4-201ENST00000561990 352 ntBASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 RN7SL555P-201ENST00000584742 339 ntBASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 AC018635.2-201ENST00000608625 364 ntBASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 AC020910.6-201ENST00000623084 1459 ntBASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 HSPA8P5-201ENST00000456928 2069 ntBASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NPIPA3F8WFD2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms