Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 AL161932.2-201ENST00000435436 679 ntBASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 AC078991.1-201ENST00000437297 610 ntBASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 LDHBP1-201ENST00000455730 1119 ntBASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 RN7SL277P-201ENST00000481521 288 ntBASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 SIGLEC18P-201ENST00000602271 909 ntBASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 AC092171.5-201ENST00000608012 942 ntBASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 AC021016.3-201ENST00000608367 477 ntBASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 AP002353.1-201ENST00000528257 1599 ntBASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA2E9PIF3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 KRT17P5-201ENST00000332088 839 ntBASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 IGF1-203ENST00000392904 761 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 AC079112.1-201ENST00000454972 939 ntBASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA2E9PIF3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA2E9PIF3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA2E9PIF3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA2E9PIF3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA2E9PIF3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA2E9PIF3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.96□□□□□ -0.34
NPIPA2E9PIF3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
NPIPA2E9PIF3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA2E9PIF3 HSPA7-201ENST00000445535 1927 ntBASIC12.96□□□□□ -0.34
NPIPA2E9PIF3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
NPIPA2E9PIF3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA2E9PIF3 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPA2E9PIF3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA2E9PIF3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NPIPA2E9PIF3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPA2E9PIF3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA2E9PIF3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA2E9PIF3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA2E9PIF3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA2E9PIF3 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA2E9PIF3 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NPIPA2E9PIF3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA2E9PIF3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NPIPA2E9PIF3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms