Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COPS3Q9UNS2 REXO1L6P-201ENST00000603433 1515 ntBASIC12.72□□□□□ -0.37
COPS3Q9UNS2 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 AL008718.2-201ENST00000609206 1313 ntBASIC12.72□□□□□ -0.37
COPS3Q9UNS2 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 SHC1P1-201ENST00000425230 1745 ntBASIC12.72□□□□□ -0.37
COPS3Q9UNS2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 AL136301.1-201ENST00000615830 422 ntBASIC12.72□□□□□ -0.37
COPS3Q9UNS2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 AOC4P-203ENST00000566825 2289 ntBASIC12.72□□□□□ -0.37
COPS3Q9UNS2 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
COPS3Q9UNS2 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 E2F3P2-201ENST00000447755 1422 ntBASIC12.71□□□□□ -0.37
COPS3Q9UNS2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 AL359845.1-201ENST00000458202 1648 ntBASIC12.71□□□□□ -0.37
COPS3Q9UNS2 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 AL391647.1-201ENST00000395664 511 ntBASIC12.71□□□□□ -0.37
COPS3Q9UNS2 AL645933.1-201ENST00000440087 609 ntBASIC12.71□□□□□ -0.37
COPS3Q9UNS2 CHMP1AP1-201ENST00000445563 662 ntBASIC12.71□□□□□ -0.37
COPS3Q9UNS2 CRB3P1-201ENST00000449338 276 ntBASIC12.71□□□□□ -0.37
COPS3Q9UNS2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 TERF1P3-201ENST00000505638 1227 ntBASIC12.71□□□□□ -0.37
COPS3Q9UNS2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
COPS3Q9UNS2 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms