Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 SNX18-202ENST00000343017 3140 ntBASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CNTNAP3Q9BZ76 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 HDGF-202ENST00000368206 960 ntTSL 5 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 PSAT1P2-201ENST00000426107 972 ntBASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 AP000533.1-201ENST00000456143 1177 ntBASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 RN7SL788P-201ENST00000460504 316 ntBASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 RN7SL277P-201ENST00000481521 288 ntBASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 AP003040.1-201ENST00000532044 1024 ntBASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 AC091691.1-201ENST00000583587 1018 ntBASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 EMP3-204ENST00000596315 761 ntTSL 2 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 BX322562.1-201ENST00000617004 561 ntBASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CNTNAP3Q9BZ76 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 CICP24-201ENST00000605464 2705 ntBASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms