Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-CQ95604 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-CQ95604 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 AC232323.1-201ENST00000540724 2099 ntBASIC14.43□□□□□ -0.1
HLA-CQ95604 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-CQ95604 AC015909.5-201ENST00000624336 2266 ntBASIC14.43□□□□□ -0.1
HLA-CQ95604 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 AL590824.1-201ENST00000403828 1349 ntBASIC14.42□□□□□ -0.1
HLA-CQ95604 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HLA-CQ95604 MYADML-201ENST00000474610 2147 ntBASIC14.42□□□□□ -0.1
HLA-CQ95604 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-CQ95604 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-CQ95604 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-CQ95604 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-CQ95604 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-CQ95604 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 THAP4-203ENST00000402545 833 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-CQ95604 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-CQ95604 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-CQ95604 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 AC099343.1-201ENST00000513481 609 ntBASIC14.42□□□□□ -0.1
HLA-CQ95604 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-CQ95604 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-CQ95604 CCND3P2-201ENST00000579393 537 ntBASIC14.42□□□□□ -0.1
HLA-CQ95604 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-CQ95604 BOLA3P2-201ENST00000586496 323 ntBASIC14.42□□□□□ -0.1
HLA-CQ95604 AC136475.7-201ENST00000602949 592 ntBASIC14.42□□□□□ -0.1
HLA-CQ95604 AC073575.2-201ENST00000614212 627 ntBASIC14.42□□□□□ -0.1
HLA-CQ95604 AC139100.2-201ENST00000616901 662 ntBASIC14.42□□□□□ -0.1
HLA-CQ95604 AL356094.1-201ENST00000624663 1212 ntBASIC14.42□□□□□ -0.1
HLA-CQ95604 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HLA-CQ95604 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-CQ95604 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 AL596257.1-201ENST00000641463 2694 ntBASIC14.42□□□□□ -0.1
HLA-CQ95604 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HLA-CQ95604 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 AL162727.3-201ENST00000635661 2787 ntBASIC14.42□□□□□ -0.1
HLA-CQ95604 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
HLA-CQ95604 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-CQ95604 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-CQ95604 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-CQ95604 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-CQ95604 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HLA-CQ95604 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-CQ95604 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-CQ95604 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-CQ95604 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-CQ95604 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-CQ95604 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.41□□□□□ -0.1
HLA-CQ95604 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-CQ95604 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-CQ95604 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
HLA-CQ95604 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HLA-CQ95604 AC215219.1-201ENST00000400706 1817 ntBASIC14.41□□□□□ -0.1
HLA-CQ95604 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-CQ95604 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-CQ95604 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-CQ95604 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-CQ95604 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-CQ95604 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-CQ95604 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-CQ95604 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HLA-CQ95604 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-CQ95604 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-CQ95604 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HLA-CQ95604 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-CQ95604 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-CQ95604 POP5-201ENST00000341039 913 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-CQ95604 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HLA-CQ95604 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HLA-CQ95604 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HLA-CQ95604 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HLA-CQ95604 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC14.41□□□□□ -0.1
HLA-CQ95604 RFNG-202ENST00000429557 994 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-CQ95604 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-CQ95604 CA5BP1-205ENST00000435806 1064 ntBASIC14.41□□□□□ -0.1
HLA-CQ95604 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms