Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC092573.1-201ENST00000433054 884 ntBASIC15.29■□□□□ 0.04
HERC6Q8IVU3 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 AL132994.1-201ENST00000554098 400 ntBASIC15.29■□□□□ 0.04
HERC6Q8IVU3 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 MIR6816-201ENST00000620368 66 ntBASIC15.29■□□□□ 0.04
HERC6Q8IVU3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HERC6Q8IVU3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 AC007686.3-201ENST00000619017 3487 ntBASIC15.28■□□□□ 0.04
HERC6Q8IVU3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 PDXDC2P-206ENST00000534700 1315 ntBASIC15.28■□□□□ 0.04
HERC6Q8IVU3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 PSAT1P2-201ENST00000426107 972 ntBASIC15.28■□□□□ 0.04
HERC6Q8IVU3 AL161932.2-201ENST00000435436 679 ntBASIC15.28■□□□□ 0.04
HERC6Q8IVU3 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 CES1P2-201ENST00000566467 1242 ntBASIC15.28■□□□□ 0.04
HERC6Q8IVU3 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 AJ011931.1-201ENST00000618749 2492 ntBASIC15.28■□□□□ 0.04
HERC6Q8IVU3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 AL365209.1-201ENST00000624418 6473 ntBASIC15.28■□□□□ 0.04
HERC6Q8IVU3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 AC018442.1-201ENST00000421439 2061 ntBASIC15.28■□□□□ 0.04
HERC6Q8IVU3 AC232323.1-201ENST00000540724 2099 ntBASIC15.28■□□□□ 0.04
HERC6Q8IVU3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HERC6Q8IVU3 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 AC097376.2-205ENST00000610159 5334 ntBASIC15.27■□□□□ 0.04
HERC6Q8IVU3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 FKBP4P8-201ENST00000610931 1369 ntBASIC15.27■□□□□ 0.04
HERC6Q8IVU3 AL365181.1-201ENST00000564032 1828 ntBASIC15.27■□□□□ 0.04
HERC6Q8IVU3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 GRK6P1-201ENST00000400595 1711 ntBASIC15.27■□□□□ 0.04
HERC6Q8IVU3 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 RNLS-203ENST00000437752 525 ntTSL 2 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 KRT18P62-201ENST00000446618 1287 ntBASIC15.27■□□□□ 0.04
HERC6Q8IVU3 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms