Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 LINC01815-202ENST00000641468 1409 ntBASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD3Q7Z3D4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 AL662890.1-201ENST00000396818 632 ntBASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 Z97180.1-201ENST00000445173 988 ntBASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 AC073150.1-201ENST00000450406 1084 ntBASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 AC106872.11-201ENST00000605838 421 ntBASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 BAP1-211ENST00000615113 489 ntBASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD3Q7Z3D4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 DUX4L50-201ENST00000455245 715 ntBASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 KRT18P15-201ENST00000458108 1291 ntBASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 AC024681.1-201ENST00000521917 487 ntBASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.28□□□□□ -0.12
LYSMD3Q7Z3D4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms