Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ACTG1P23-201ENST00000437653 1074 ntBASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
VPS13DQ5THJ4 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AC067942.1-202ENST00000471756 1057 ntBASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 RPL29P2-201ENST00000488409 460 ntBASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 IGHVII-33-1-201ENST00000524010 280 ntBASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 OR3A1-202ENST00000615105 966 ntBASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 ERG-211ENST00000453032 1595 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AC015818.1-201ENST00000451011 244 ntBASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 RN7SL646P-201ENST00000492969 297 ntBASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 TPST2P1-201ENST00000564073 1102 ntBASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AC116347.1-201ENST00000442824 720 ntBASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AC007336.3-201ENST00000623886 2160 ntBASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 PMF1-201ENST00000368273 884 ntTSL 2 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AC099343.1-201ENST00000513481 609 ntBASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 SNORA50D-202ENST00000627561 132 ntBASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 ATF4P4-201ENST00000393544 1930 ntBASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC9.1□□□□□ -0.95
VPS13DQ5THJ4 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AC111170.3-201ENST00000624282 2464 ntBASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AC106785.2-201ENST00000564385 1319 ntBASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 RPL18AP15-201ENST00000430258 517 ntBASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 MTHFD2P7-201ENST00000483867 983 ntBASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AL031768.1-201ENST00000606542 701 ntBASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 PAX6-247ENST00000638965 979 ntTSL 5 BASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AC012358.2-201ENST00000430010 1434 ntBASIC9.09□□□□□ -0.95
VPS13DQ5THJ4 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms