Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CCND3P1-201ENST00000438347 580 ntBASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 RN7SL684P-201ENST00000465665 294 ntBASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 OR2A1-AS1-203ENST00000468575 568 ntBASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 BOLA3P2-201ENST00000586496 323 ntBASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 AC134878.2-201ENST00000620700 1265 ntBASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 LINC01101-201ENST00000622953 1884 ntBASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 AC117503.4-201ENST00000623229 1418 ntBASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 LAP3P2-201ENST00000454686 1454 ntBASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 AC023024.2-201ENST00000623561 1993 ntBASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RSPO4Q2I0M5 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 LINC00528-201ENST00000600723 2160 ntBASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 AC006504.5-208ENST00000588784 2401 ntBASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 MIR193A-201ENST00000384882 88 ntBASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 WDR54-202ENST00000409791 854 ntTSL 3 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 AP000845.1-201ENST00000581677 2131 ntBASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RSPO4Q2I0M5 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RSPO4Q2I0M5 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.58□□□□□ -0.23
RSPO4Q2I0M5 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RSPO4Q2I0M5 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
RSPO4Q2I0M5 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
RSPO4Q2I0M5 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
RSPO4Q2I0M5 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RSPO4Q2I0M5 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.58□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms