Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CACNB3P54284 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC16.62■□□□□ 0.25
CACNB3P54284 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.62■□□□□ 0.25
CACNB3P54284 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CACNB3P54284 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CACNB3P54284 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CACNB3P54284 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC16.62■□□□□ 0.25
CACNB3P54284 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CACNB3P54284 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 MIR1301-201ENST00000408518 82 ntBASIC16.62■□□□□ 0.25
CACNB3P54284 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC16.62■□□□□ 0.25
CACNB3P54284 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.62■□□□□ 0.25
CACNB3P54284 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.62■□□□□ 0.25
CACNB3P54284 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.62■□□□□ 0.25
CACNB3P54284 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CACNB3P54284 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.62■□□□□ 0.25
CACNB3P54284 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.62■□□□□ 0.25
CACNB3P54284 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC16.62■□□□□ 0.25
CACNB3P54284 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CACNB3P54284 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.62■□□□□ 0.25
CACNB3P54284 AC092862.1-201ENST00000541534 533 ntBASIC16.62■□□□□ 0.25
CACNB3P54284 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.62■□□□□ 0.25
CACNB3P54284 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.62■□□□□ 0.25
CACNB3P54284 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC16.62■□□□□ 0.25
CACNB3P54284 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC16.62■□□□□ 0.25
CACNB3P54284 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC16.62■□□□□ 0.25
CACNB3P54284 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.62■□□□□ 0.25
CACNB3P54284 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CACNB3P54284 AC015802.1-201ENST00000588104 1449 ntBASIC16.62■□□□□ 0.25
CACNB3P54284 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC16.62■□□□□ 0.25
CACNB3P54284 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.62■□□□□ 0.25
CACNB3P54284 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CACNB3P54284 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CACNB3P54284 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.61■□□□□ 0.25
CACNB3P54284 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CACNB3P54284 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.61■□□□□ 0.25
CACNB3P54284 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.61■□□□□ 0.25
CACNB3P54284 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.61■□□□□ 0.25
CACNB3P54284 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 SSR4-202ENST00000370085 526 ntTSL 2 BASIC16.61■□□□□ 0.25
CACNB3P54284 FAM21EP-201ENST00000417804 985 ntBASIC16.61■□□□□ 0.25
CACNB3P54284 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.61■□□□□ 0.25
CACNB3P54284 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.61■□□□□ 0.25
CACNB3P54284 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC16.61■□□□□ 0.25
CACNB3P54284 CISD2-202ENST00000503643 808 ntTSL 2 BASIC16.61■□□□□ 0.25
CACNB3P54284 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 MT3-202ENST00000561640 514 ntTSL 3 BASIC16.61■□□□□ 0.25
CACNB3P54284 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.61■□□□□ 0.25
CACNB3P54284 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 AC126755.5-201ENST00000622756 267 ntBASIC16.61■□□□□ 0.25
CACNB3P54284 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC16.61■□□□□ 0.25
CACNB3P54284 RARS-210ENST00000626454 177 ntTSL 5 BASIC16.61■□□□□ 0.25
CACNB3P54284 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.61■□□□□ 0.25
CACNB3P54284 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.61■□□□□ 0.25
CACNB3P54284 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC16.61■□□□□ 0.25
CACNB3P54284 TUBB8P4-201ENST00000511806 1324 ntBASIC16.61■□□□□ 0.25
CACNB3P54284 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CACNB3P54284 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.61■□□□□ 0.25
CACNB3P54284 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.61■□□□□ 0.25
CACNB3P54284 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CACNB3P54284 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.61■□□□□ 0.25
CACNB3P54284 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.6■□□□□ 0.25
CACNB3P54284 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.6■□□□□ 0.25
CACNB3P54284 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CACNB3P54284 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.6■□□□□ 0.25
CACNB3P54284 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CACNB3P54284 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.6■□□□□ 0.25
CACNB3P54284 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CACNB3P54284 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms