Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC12.79□□□□□ -0.36
ATRXP46100 AC093700.1-201ENST00000503348 717 ntBASIC12.79□□□□□ -0.36
ATRXP46100 RNA5SP420-201ENST00000516997 137 ntBASIC12.79□□□□□ -0.36
ATRXP46100 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATRXP46100 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC12.79□□□□□ -0.36
ATRXP46100 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ATRXP46100 AP005264.5-201ENST00000590066 467 ntBASIC12.79□□□□□ -0.36
ATRXP46100 AC015802.4-203ENST00000592622 570 ntTSL 4 BASIC12.79□□□□□ -0.36
ATRXP46100 AC147067.2-201ENST00000608161 289 ntBASIC12.79□□□□□ -0.36
ATRXP46100 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC12.79□□□□□ -0.36
ATRXP46100 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATRXP46100 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATRXP46100 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.79□□□□□ -0.36
ATRXP46100 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
ATRXP46100 AC232323.1-201ENST00000540724 2099 ntBASIC12.79□□□□□ -0.36
ATRXP46100 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
ATRXP46100 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
ATRXP46100 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.78□□□□□ -0.36
ATRXP46100 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.78□□□□□ -0.36
ATRXP46100 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.78□□□□□ -0.36
ATRXP46100 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ATRXP46100 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ATRXP46100 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.78□□□□□ -0.36
ATRXP46100 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.78□□□□□ -0.36
ATRXP46100 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ATRXP46100 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
ATRXP46100 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.78□□□□□ -0.36
ATRXP46100 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 AC074019.1-201ENST00000428788 1096 ntBASIC12.78□□□□□ -0.36
ATRXP46100 SRP9P1-201ENST00000445874 261 ntBASIC12.78□□□□□ -0.36
ATRXP46100 GYG1-209ENST00000483267 801 ntTSL 2 BASIC12.78□□□□□ -0.36
ATRXP46100 RNA5SP288-201ENST00000516075 93 ntBASIC12.78□□□□□ -0.36
ATRXP46100 MT3-202ENST00000561640 514 ntTSL 3 BASIC12.78□□□□□ -0.36
ATRXP46100 RN7SL455P-201ENST00000580629 282 ntBASIC12.78□□□□□ -0.36
ATRXP46100 AC090616.6-202ENST00000583601 1088 ntBASIC12.78□□□□□ -0.36
ATRXP46100 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC12.78□□□□□ -0.36
ATRXP46100 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ATRXP46100 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
ATRXP46100 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.78□□□□□ -0.36
ATRXP46100 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.78□□□□□ -0.36
ATRXP46100 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
ATRXP46100 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.78□□□□□ -0.36
ATRXP46100 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC12.78□□□□□ -0.36
ATRXP46100 GRPEL2P1-201ENST00000453145 339 ntBASIC12.78□□□□□ -0.36
ATRXP46100 IGHV7-56-201ENST00000518372 351 ntBASIC12.78□□□□□ -0.36
ATRXP46100 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC12.78□□□□□ -0.36
ATRXP46100 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC12.78□□□□□ -0.36
ATRXP46100 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC12.78□□□□□ -0.36
ATRXP46100 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATRXP46100 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.78□□□□□ -0.36
ATRXP46100 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
ATRXP46100 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATRXP46100 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
ATRXP46100 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ATRXP46100 LILRP2-202ENST00000413572 1383 ntBASIC12.77□□□□□ -0.36
ATRXP46100 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATRXP46100 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.77□□□□□ -0.36
ATRXP46100 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATRXP46100 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
ATRXP46100 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATRXP46100 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
ATRXP46100 AC015688.4-201ENST00000580780 1647 ntBASIC12.77□□□□□ -0.36
ATRXP46100 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATRXP46100 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATRXP46100 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATRXP46100 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATRXP46100 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATRXP46100 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATRXP46100 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
ATRXP46100 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC12.77□□□□□ -0.37
ATRXP46100 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
ATRXP46100 AL161727.1-201ENST00000457409 530 ntBASIC12.77□□□□□ -0.37
ATRXP46100 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATRXP46100 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATRXP46100 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATRXP46100 Z82244.1-201ENST00000631502 840 ntBASIC12.77□□□□□ -0.37
ATRXP46100 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.77□□□□□ -0.37
ATRXP46100 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.77□□□□□ -0.37
ATRXP46100 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATRXP46100 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.77□□□□□ -0.37
ATRXP46100 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATRXP46100 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATRXP46100 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATRXP46100 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms