Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.63■□□□□ 0.09
RFC5P40937 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.63■□□□□ 0.09
RFC5P40937 MIR2392-201ENST00000584881 84 ntBASIC15.63■□□□□ 0.09
RFC5P40937 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.63■□□□□ 0.09
RFC5P40937 AC084781.1-201ENST00000613737 656 ntBASIC15.63■□□□□ 0.09
RFC5P40937 COX6A1P2-201ENST00000620597 330 ntBASIC15.63■□□□□ 0.09
RFC5P40937 YRDCP1-201ENST00000621419 643 ntBASIC15.63■□□□□ 0.09
RFC5P40937 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC5P40937 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFC5P40937 AC068760.1-201ENST00000493579 1953 ntBASIC15.63■□□□□ 0.09
RFC5P40937 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFC5P40937 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.63■□□□□ 0.09
RFC5P40937 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.63■□□□□ 0.09
RFC5P40937 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RFC5P40937 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC5P40937 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.63■□□□□ 0.09
RFC5P40937 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
RFC5P40937 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC5P40937 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RFC5P40937 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RFC5P40937 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.63■□□□□ 0.09
RFC5P40937 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RFC5P40937 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC5P40937 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC5P40937 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RFC5P40937 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC5P40937 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RFC5P40937 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC5P40937 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.62■□□□□ 0.09
RFC5P40937 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.62■□□□□ 0.09
RFC5P40937 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC5P40937 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.62■□□□□ 0.09
RFC5P40937 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.62■□□□□ 0.09
RFC5P40937 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.62■□□□□ 0.09
RFC5P40937 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 SCARNA12-201ENST00000459155 270 ntBASIC15.62■□□□□ 0.09
RFC5P40937 RN7SL788P-201ENST00000460504 316 ntBASIC15.62■□□□□ 0.09
RFC5P40937 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.62■□□□□ 0.09
RFC5P40937 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.62■□□□□ 0.09
RFC5P40937 MIR4706-201ENST00000582134 82 ntBASIC15.62■□□□□ 0.09
RFC5P40937 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.62■□□□□ 0.09
RFC5P40937 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.62■□□□□ 0.09
RFC5P40937 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.62■□□□□ 0.09
RFC5P40937 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.62■□□□□ 0.09
RFC5P40937 AC092171.5-201ENST00000608012 942 ntBASIC15.62■□□□□ 0.09
RFC5P40937 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RFC5P40937 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC5P40937 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.62■□□□□ 0.09
RFC5P40937 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.62■□□□□ 0.09
RFC5P40937 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC5P40937 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 AL359183.1-201ENST00000623796 2132 ntBASIC15.62■□□□□ 0.09
RFC5P40937 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.62■□□□□ 0.09
RFC5P40937 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC5P40937 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RFC5P40937 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.62■□□□□ 0.09
RFC5P40937 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.62■□□□□ 0.09
RFC5P40937 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RFC5P40937 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC5P40937 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC5P40937 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.62■□□□□ 0.09
RFC5P40937 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RFC5P40937 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.62■□□□□ 0.09
RFC5P40937 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.61■□□□□ 0.09
RFC5P40937 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RFC5P40937 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RFC5P40937 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RFC5P40937 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RFC5P40937 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.61■□□□□ 0.09
RFC5P40937 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms