Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.59□□□□□ -0.07
ERCC2P18074 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ERCC2P18074 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
ERCC2P18074 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.59□□□□□ -0.07
ERCC2P18074 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.59□□□□□ -0.07
ERCC2P18074 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
ERCC2P18074 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 KRT17P5-201ENST00000332088 839 ntBASIC14.59□□□□□ -0.07
ERCC2P18074 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
ERCC2P18074 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.59□□□□□ -0.07
ERCC2P18074 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.59□□□□□ -0.07
ERCC2P18074 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.59□□□□□ -0.07
ERCC2P18074 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.59□□□□□ -0.07
ERCC2P18074 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.59□□□□□ -0.07
ERCC2P18074 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.59□□□□□ -0.07
ERCC2P18074 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.59□□□□□ -0.07
ERCC2P18074 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 AC116345.2-201ENST00000512837 523 ntBASIC14.59□□□□□ -0.07
ERCC2P18074 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.59□□□□□ -0.07
ERCC2P18074 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.59□□□□□ -0.07
ERCC2P18074 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.59□□□□□ -0.07
ERCC2P18074 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.59□□□□□ -0.07
ERCC2P18074 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.59□□□□□ -0.07
ERCC2P18074 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.59□□□□□ -0.07
ERCC2P18074 AC067931.2-201ENST00000623655 2003 ntBASIC14.59□□□□□ -0.07
ERCC2P18074 AC015909.5-201ENST00000624336 2266 ntBASIC14.59□□□□□ -0.07
ERCC2P18074 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.59□□□□□ -0.07
ERCC2P18074 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.59□□□□□ -0.07
ERCC2P18074 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ERCC2P18074 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ERCC2P18074 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ERCC2P18074 PTENP1-202ENST00000532280 3996 ntBASIC14.58□□□□□ -0.07
ERCC2P18074 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.58□□□□□ -0.07
ERCC2P18074 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
ERCC2P18074 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.58□□□□□ -0.07
ERCC2P18074 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.58□□□□□ -0.07
ERCC2P18074 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ERCC2P18074 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ERCC2P18074 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ERCC2P18074 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.58□□□□□ -0.07
ERCC2P18074 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ERCC2P18074 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ERCC2P18074 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
ERCC2P18074 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ERCC2P18074 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.58□□□□□ -0.08
ERCC2P18074 RN7SL11P-201ENST00000471305 293 ntBASIC14.58□□□□□ -0.08
ERCC2P18074 ALG1L13P-202ENST00000519320 584 ntBASIC14.58□□□□□ -0.08
ERCC2P18074 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.58□□□□□ -0.08
ERCC2P18074 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.58□□□□□ -0.08
ERCC2P18074 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
ERCC2P18074 MIR6787-201ENST00000616675 61 ntBASIC14.58□□□□□ -0.08
ERCC2P18074 CR392039.2-201ENST00000623182 509 ntBASIC14.58□□□□□ -0.08
ERCC2P18074 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
ERCC2P18074 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ERCC2P18074 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
ERCC2P18074 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ERCC2P18074 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.58□□□□□ -0.08
ERCC2P18074 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ERCC2P18074 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.58□□□□□ -0.08
ERCC2P18074 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ERCC2P18074 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.58□□□□□ -0.08
ERCC2P18074 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms