Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.59■□□□□ 0.09
GAP43P17677 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.59■□□□□ 0.09
GAP43P17677 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.59■□□□□ 0.09
GAP43P17677 NCLP1-201ENST00000445357 1963 ntBASIC15.59■□□□□ 0.09
GAP43P17677 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 AC073869.2-201ENST00000417338 1026 ntBASIC15.59■□□□□ 0.09
GAP43P17677 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.59■□□□□ 0.09
GAP43P17677 AL353637.1-201ENST00000451571 732 ntBASIC15.59■□□□□ 0.09
GAP43P17677 SLC25A15P3-201ENST00000505530 290 ntBASIC15.59■□□□□ 0.09
GAP43P17677 AC114947.1-202ENST00000514136 344 ntBASIC15.59■□□□□ 0.09
GAP43P17677 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
GAP43P17677 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
GAP43P17677 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
GAP43P17677 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
GAP43P17677 ACTG1P17-201ENST00000558391 1119 ntBASIC15.59■□□□□ 0.09
GAP43P17677 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.59■□□□□ 0.09
GAP43P17677 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
GAP43P17677 AL021707.6-201ENST00000609212 491 ntBASIC15.59■□□□□ 0.09
GAP43P17677 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.59■□□□□ 0.09
GAP43P17677 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.59■□□□□ 0.09
GAP43P17677 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
GAP43P17677 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
GAP43P17677 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.59■□□□□ 0.09
GAP43P17677 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.59■□□□□ 0.09
GAP43P17677 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 SALL4P6-201ENST00000429385 1691 ntBASIC15.59■□□□□ 0.09
GAP43P17677 KRT18P9-201ENST00000604826 1300 ntBASIC15.59■□□□□ 0.09
GAP43P17677 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.59■□□□□ 0.09
GAP43P17677 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
GAP43P17677 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.59■□□□□ 0.09
GAP43P17677 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 KRT8P31-201ENST00000504812 1408 ntBASIC15.59■□□□□ 0.09
GAP43P17677 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GAP43P17677 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
GAP43P17677 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
GAP43P17677 FAM90A12P-201ENST00000519497 2375 ntBASIC15.58■□□□□ 0.09
GAP43P17677 FAM90A24P-201ENST00000520792 2369 ntBASIC15.58■□□□□ 0.09
GAP43P17677 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
GAP43P17677 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.58■□□□□ 0.09
GAP43P17677 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
GAP43P17677 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
GAP43P17677 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
GAP43P17677 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.58■□□□□ 0.09
GAP43P17677 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.58■□□□□ 0.09
GAP43P17677 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
GAP43P17677 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GAP43P17677 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAP43P17677 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
GAP43P17677 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GAP43P17677 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
GAP43P17677 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GAP43P17677 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAP43P17677 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAP43P17677 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAP43P17677 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAP43P17677 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.58■□□□□ 0.08
GAP43P17677 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GAP43P17677 PDIA3P2-201ENST00000428073 158 ntBASIC15.58■□□□□ 0.08
GAP43P17677 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.58■□□□□ 0.08
GAP43P17677 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.58■□□□□ 0.08
GAP43P17677 AC026320.2-201ENST00000434379 478 ntBASIC15.58■□□□□ 0.08
GAP43P17677 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.58■□□□□ 0.08
GAP43P17677 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.58■□□□□ 0.08
GAP43P17677 AC012618.1-201ENST00000461223 412 ntBASIC15.58■□□□□ 0.08
GAP43P17677 AC008723.1-201ENST00000506922 207 ntBASIC15.58■□□□□ 0.08
GAP43P17677 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.58■□□□□ 0.08
GAP43P17677 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAP43P17677 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.58■□□□□ 0.08
GAP43P17677 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAP43P17677 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
GAP43P17677 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
GAP43P17677 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.58■□□□□ 0.08
GAP43P17677 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.58■□□□□ 0.08
GAP43P17677 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
GAP43P17677 AL109837.1-201ENST00000603272 613 ntBASIC15.58■□□□□ 0.08
GAP43P17677 AP001505.2-201ENST00000616815 443 ntBASIC15.58■□□□□ 0.08
GAP43P17677 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.58■□□□□ 0.08
GAP43P17677 AL139424.3-202ENST00000641619 917 ntBASIC15.58■□□□□ 0.08
GAP43P17677 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAP43P17677 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAP43P17677 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAP43P17677 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.58■□□□□ 0.08
GAP43P17677 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GAP43P17677 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms