Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC13.26□□□□□ -0.29
CCL4P13236 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.26□□□□□ -0.29
CCL4P13236 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC13.26□□□□□ -0.29
CCL4P13236 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CCL4P13236 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CCL4P13236 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.26□□□□□ -0.29
CCL4P13236 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CCL4P13236 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL4P13236 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CCL4P13236 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL4P13236 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCL4P13236 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL4P13236 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL4P13236 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CCL4P13236 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CCL4P13236 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL4P13236 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL4P13236 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CCL4P13236 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CCL4P13236 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL4P13236 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL4P13236 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 PSAT1P2-201ENST00000426107 972 ntBASIC13.25□□□□□ -0.29
CCL4P13236 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CCL4P13236 FAU-202ENST00000434372 533 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL4P13236 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL4P13236 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC13.25□□□□□ -0.29
CCL4P13236 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL4P13236 AC106047.2-201ENST00000511723 743 ntBASIC13.25□□□□□ -0.29
CCL4P13236 AC012158.2-201ENST00000536546 354 ntBASIC13.25□□□□□ -0.29
CCL4P13236 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL4P13236 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL4P13236 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL4P13236 AL139339.2-201ENST00000608063 657 ntBASIC13.25□□□□□ -0.29
CCL4P13236 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC13.25□□□□□ -0.29
CCL4P13236 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC13.25□□□□□ -0.29
CCL4P13236 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL4P13236 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 AC140479.7-201ENST00000636301 2332 ntBASIC13.25□□□□□ -0.29
CCL4P13236 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL4P13236 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCL4P13236 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.25□□□□□ -0.29
CCL4P13236 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CCL4P13236 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CCL4P13236 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL4P13236 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
CCL4P13236 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CCL4P13236 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL4P13236 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL4P13236 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CCL4P13236 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL4P13236 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCL4P13236 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CCL4P13236 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 TUBB8P4-201ENST00000511806 1324 ntBASIC13.24□□□□□ -0.29
CCL4P13236 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL4P13236 MIR1307-201ENST00000408840 149 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 496.8 ms