Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AL031673.1-201ENST00000611460 466 ntBASIC16.93■□□□□ 0.3
CHGBP05060 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.93■□□□□ 0.3
CHGBP05060 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.93■□□□□ 0.3
CHGBP05060 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHGBP05060 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CHGBP05060 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHGBP05060 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 PCDHA3-202ENST00000532566 4594 ntBASIC16.93■□□□□ 0.3
CHGBP05060 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CHGBP05060 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 AL590824.1-201ENST00000403828 1349 ntBASIC16.93■□□□□ 0.3
CHGBP05060 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.93■□□□□ 0.3
CHGBP05060 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHGBP05060 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHGBP05060 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 AC093462.1-201ENST00000621167 1683 ntBASIC16.92■□□□□ 0.3
CHGBP05060 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CHGBP05060 AC026316.1-201ENST00000398900 414 ntBASIC16.92■□□□□ 0.3
CHGBP05060 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.92■□□□□ 0.3
CHGBP05060 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.92■□□□□ 0.3
CHGBP05060 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.92■□□□□ 0.3
CHGBP05060 RN7SL788P-201ENST00000460504 316 ntBASIC16.92■□□□□ 0.3
CHGBP05060 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CHGBP05060 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CHGBP05060 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.92■□□□□ 0.3
CHGBP05060 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CHGBP05060 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.92■□□□□ 0.3
CHGBP05060 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.92■□□□□ 0.3
CHGBP05060 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.92■□□□□ 0.3
CHGBP05060 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.92■□□□□ 0.3
CHGBP05060 MIR3147-201ENST00000577811 66 ntBASIC16.92■□□□□ 0.3
CHGBP05060 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CHGBP05060 AC103810.10-201ENST00000606504 343 ntBASIC16.92■□□□□ 0.3
CHGBP05060 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.92■□□□□ 0.3
CHGBP05060 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.92■□□□□ 0.3
CHGBP05060 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CHGBP05060 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC16.92■□□□□ 0.3
CHGBP05060 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.92■□□□□ 0.3
CHGBP05060 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHGBP05060 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHGBP05060 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CHGBP05060 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.91■□□□□ 0.3
CHGBP05060 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.91■□□□□ 0.3
CHGBP05060 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHGBP05060 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.91■□□□□ 0.3
CHGBP05060 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHGBP05060 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHGBP05060 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC16.91■□□□□ 0.3
CHGBP05060 CROT-203ENST00000419147 2959 ntTSL 2 BASIC16.91■□□□□ 0.3
CHGBP05060 GRK6P1-201ENST00000400595 1711 ntBASIC16.91■□□□□ 0.3
CHGBP05060 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CHGBP05060 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.91■□□□□ 0.3
CHGBP05060 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHGBP05060 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC16.91■□□□□ 0.3
CHGBP05060 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHGBP05060 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.91■□□□□ 0.3
CHGBP05060 RPL3P2-204ENST00000413027 1203 ntBASIC16.91■□□□□ 0.3
CHGBP05060 HINT2P1-201ENST00000419438 481 ntBASIC16.91■□□□□ 0.3
CHGBP05060 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.91■□□□□ 0.3
CHGBP05060 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.91■□□□□ 0.3
CHGBP05060 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHGBP05060 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHGBP05060 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.91■□□□□ 0.3
CHGBP05060 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.91■□□□□ 0.3
CHGBP05060 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.91■□□□□ 0.3
CHGBP05060 RN7SL665P-201ENST00000578793 300 ntBASIC16.91■□□□□ 0.3
CHGBP05060 MIR4706-201ENST00000582134 82 ntBASIC16.91■□□□□ 0.3
CHGBP05060 AC128714.1-201ENST00000637035 887 ntBASIC16.91■□□□□ 0.3
CHGBP05060 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHGBP05060 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.91■□□□□ 0.3
CHGBP05060 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.91■□□□□ 0.3
CHGBP05060 STK25-235ENST00000543554 2556 ntTSL 2 BASIC16.91■□□□□ 0.3
CHGBP05060 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.91■□□□□ 0.3
CHGBP05060 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHGBP05060 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms