Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
UPK2O00526 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.41□□□□□ -0.58
UPK2O00526 AC004241.5-201ENST00000623870 2448 ntBASIC11.41□□□□□ -0.58
UPK2O00526 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC11.41□□□□□ -0.58
UPK2O00526 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
UPK2O00526 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
UPK2O00526 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
UPK2O00526 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.41□□□□□ -0.58
UPK2O00526 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
UPK2O00526 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 LINC00115-201ENST00000473798 1317 ntBASIC11.41□□□□□ -0.58
UPK2O00526 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC11.41□□□□□ -0.58
UPK2O00526 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
UPK2O00526 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.41□□□□□ -0.58
UPK2O00526 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.41□□□□□ -0.58
UPK2O00526 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11.41□□□□□ -0.58
UPK2O00526 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
UPK2O00526 KRT18P36-201ENST00000411618 1276 ntBASIC11.41□□□□□ -0.58
UPK2O00526 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC11.41□□□□□ -0.58
UPK2O00526 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC11.41□□□□□ -0.58
UPK2O00526 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 AC092580.1-201ENST00000433998 658 ntBASIC11.41□□□□□ -0.58
UPK2O00526 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
UPK2O00526 OR2R1P-201ENST00000441404 914 ntBASIC11.41□□□□□ -0.58
UPK2O00526 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC11.41□□□□□ -0.58
UPK2O00526 AC234783.1-201ENST00000441761 496 ntBASIC11.41□□□□□ -0.58
UPK2O00526 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.41□□□□□ -0.58
UPK2O00526 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC11.41□□□□□ -0.58
UPK2O00526 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC11.41□□□□□ -0.58
UPK2O00526 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
UPK2O00526 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC11.41□□□□□ -0.58
UPK2O00526 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
UPK2O00526 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.41□□□□□ -0.58
UPK2O00526 CR383656.12-201ENST00000549567 513 ntBASIC11.41□□□□□ -0.58
UPK2O00526 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.41□□□□□ -0.58
UPK2O00526 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.41□□□□□ -0.58
UPK2O00526 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC11.41□□□□□ -0.58
UPK2O00526 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 RPS24-214ENST00000613865 538 ntTSL 5 BASIC11.41□□□□□ -0.58
UPK2O00526 WNT11-204ENST00000621122 789 ntTSL 5 BASIC11.41□□□□□ -0.58
UPK2O00526 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.41□□□□□ -0.58
UPK2O00526 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC11.41□□□□□ -0.58
UPK2O00526 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.41□□□□□ -0.58
UPK2O00526 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.41□□□□□ -0.58
UPK2O00526 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
UPK2O00526 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
UPK2O00526 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 NME1-209ENST00000511355 1645 ntTSL 5 BASIC11.41□□□□□ -0.58
UPK2O00526 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
UPK2O00526 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.41□□□□□ -0.58
UPK2O00526 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
UPK2O00526 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UPK2O00526 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK2O00526 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK2O00526 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.4□□□□□ -0.58
UPK2O00526 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK2O00526 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UPK2O00526 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK2O00526 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK2O00526 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK2O00526 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UPK2O00526 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.4□□□□□ -0.58
UPK2O00526 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK2O00526 AC099521.3-201ENST00000624251 2938 ntBASIC11.4□□□□□ -0.58
UPK2O00526 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
UPK2O00526 SALL4P6-201ENST00000429385 1691 ntBASIC11.4□□□□□ -0.58
UPK2O00526 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
UPK2O00526 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.4□□□□□ -0.58
UPK2O00526 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC11.4□□□□□ -0.58
UPK2O00526 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms