Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN5O00501 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLDN5O00501 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLDN5O00501 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN5O00501 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN5O00501 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN5O00501 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN5O00501 CHCHD2P9-201ENST00000461726 456 ntBASIC14.91□□□□□ -0.02
CLDN5O00501 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.91□□□□□ -0.02
CLDN5O00501 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CLDN5O00501 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.91□□□□□ -0.02
CLDN5O00501 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDN5O00501 AC073352.2-201ENST00000609385 439 ntBASIC14.91□□□□□ -0.02
CLDN5O00501 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CLDN5O00501 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.91□□□□□ -0.02
CLDN5O00501 YRDCP1-201ENST00000621419 643 ntBASIC14.91□□□□□ -0.02
CLDN5O00501 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN5O00501 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN5O00501 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.91□□□□□ -0.02
CLDN5O00501 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
CLDN5O00501 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN5O00501 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLDN5O00501 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
CLDN5O00501 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CLDN5O00501 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLDN5O00501 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN5O00501 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLDN5O00501 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN5O00501 AL513477.1-201ENST00000602865 2407 ntBASIC14.9□□□□□ -0.02
CLDN5O00501 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.9□□□□□ -0.02
CLDN5O00501 AC078991.1-201ENST00000437297 610 ntBASIC14.9□□□□□ -0.02
CLDN5O00501 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN5O00501 TMEM198B-204ENST00000484016 896 ntBASIC14.9□□□□□ -0.02
CLDN5O00501 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.9□□□□□ -0.02
CLDN5O00501 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN5O00501 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.9□□□□□ -0.02
CLDN5O00501 MIR3147-201ENST00000577811 66 ntBASIC14.9□□□□□ -0.02
CLDN5O00501 MIR4706-201ENST00000582134 82 ntBASIC14.9□□□□□ -0.02
CLDN5O00501 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CLDN5O00501 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.9□□□□□ -0.02
CLDN5O00501 SIGLEC22P-201ENST00000599104 714 ntBASIC14.9□□□□□ -0.02
CLDN5O00501 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.9□□□□□ -0.02
CLDN5O00501 AC092171.5-201ENST00000608012 942 ntBASIC14.9□□□□□ -0.02
CLDN5O00501 MIR6842-201ENST00000612539 65 ntBASIC14.9□□□□□ -0.02
CLDN5O00501 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN5O00501 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CLDN5O00501 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN5O00501 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN5O00501 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN5O00501 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms