Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AL583805.1-201ENST00000391389 531 ntBASIC14.22□□□□□ -0.13
SPASTQ9UBP0 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 ST13P19-201ENST00000442505 1124 ntBASIC14.22□□□□□ -0.13
SPASTQ9UBP0 AC098935.1-201ENST00000446057 611 ntBASIC14.22□□□□□ -0.13
SPASTQ9UBP0 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 MIR3147-201ENST00000577811 66 ntBASIC14.22□□□□□ -0.13
SPASTQ9UBP0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 AC015802.1-201ENST00000588104 1449 ntBASIC14.22□□□□□ -0.13
SPASTQ9UBP0 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 RPSAP15-201ENST00000448168 861 ntBASIC14.21□□□□□ -0.13
SPASTQ9UBP0 DUX4L50-201ENST00000455245 715 ntBASIC14.21□□□□□ -0.13
SPASTQ9UBP0 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 AL591471.1-201ENST00000621855 229 ntBASIC14.21□□□□□ -0.13
SPASTQ9UBP0 AL805961.1-201ENST00000642026 753 ntBASIC14.21□□□□□ -0.13
SPASTQ9UBP0 AC010327.5-201ENST00000586923 3061 ntBASIC14.21□□□□□ -0.13
SPASTQ9UBP0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPASTQ9UBP0 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.21□□□□□ -0.14
SPASTQ9UBP0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.21□□□□□ -0.14
SPASTQ9UBP0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SPASTQ9UBP0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
SPASTQ9UBP0 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SPASTQ9UBP0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SPASTQ9UBP0 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
SPASTQ9UBP0 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SPASTQ9UBP0 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SPASTQ9UBP0 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SPASTQ9UBP0 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
SPASTQ9UBP0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SPASTQ9UBP0 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 AC074138.1-201ENST00000611182 1303 ntBASIC14.2□□□□□ -0.14
SPASTQ9UBP0 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.2□□□□□ -0.14
SPASTQ9UBP0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms