Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 KRT18P36-201ENST00000411618 1276 ntBASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 BX284668.4-201ENST00000453917 508 ntBASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 RCC2P8-201ENST00000502779 1035 ntBASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 MIR3188-201ENST00000583494 85 ntBASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 AC026740.1-201ENST00000607068 791 ntBASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 AC092299.1-201ENST00000632679 757 ntBASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 COL6A4P2-202ENST00000504443 2753 ntBASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 DGCR9-201ENST00000609630 2415 ntBASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 AC020910.6-201ENST00000623084 1459 ntBASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 USP17L6P-201ENST00000382470 1197 ntBASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 AC016700.1-201ENST00000429424 312 ntBASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 FNTAP2-201ENST00000430308 634 ntBASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 MIR3615-201ENST00000581999 87 ntBASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 NDUFV2P1-201ENST00000596415 907 ntBASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 AC244093.1-201ENST00000610837 814 ntBASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 AC091544.8-201ENST00000619490 361 ntBASIC12.8□□□□□ -0.36
PARPBPQ9NWS1 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms