Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.56□□□□□ -0.24
CGREF1Q99674 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CGREF1Q99674 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CGREF1Q99674 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CGREF1Q99674 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.56□□□□□ -0.24
CGREF1Q99674 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 MIR661-201ENST00000384842 89 ntBASIC13.56□□□□□ -0.24
CGREF1Q99674 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.56□□□□□ -0.24
CGREF1Q99674 ST13P19-201ENST00000442505 1124 ntBASIC13.56□□□□□ -0.24
CGREF1Q99674 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CGREF1Q99674 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.56□□□□□ -0.24
CGREF1Q99674 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.56□□□□□ -0.24
CGREF1Q99674 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CGREF1Q99674 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.56□□□□□ -0.24
CGREF1Q99674 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.56□□□□□ -0.24
CGREF1Q99674 LINC02560-201ENST00000596379 459 ntBASIC13.56□□□□□ -0.24
CGREF1Q99674 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.56□□□□□ -0.24
CGREF1Q99674 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CGREF1Q99674 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CGREF1Q99674 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.56□□□□□ -0.24
CGREF1Q99674 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.56□□□□□ -0.24
CGREF1Q99674 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CGREF1Q99674 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.56□□□□□ -0.24
CGREF1Q99674 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.56□□□□□ -0.24
CGREF1Q99674 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.56□□□□□ -0.24
CGREF1Q99674 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CGREF1Q99674 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.56□□□□□ -0.24
CGREF1Q99674 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CGREF1Q99674 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
CGREF1Q99674 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.55□□□□□ -0.24
CGREF1Q99674 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
CGREF1Q99674 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.55□□□□□ -0.24
CGREF1Q99674 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
CGREF1Q99674 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CGREF1Q99674 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.55□□□□□ -0.24
CGREF1Q99674 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.55□□□□□ -0.24
CGREF1Q99674 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.55□□□□□ -0.24
CGREF1Q99674 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.55□□□□□ -0.24
CGREF1Q99674 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 PIN1P1-201ENST00000412108 996 ntBASIC13.55□□□□□ -0.24
CGREF1Q99674 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.55□□□□□ -0.24
CGREF1Q99674 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.55□□□□□ -0.24
CGREF1Q99674 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.55□□□□□ -0.24
CGREF1Q99674 CYMP-203ENST00000474680 1263 ntBASIC13.55□□□□□ -0.24
CGREF1Q99674 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 COX5BP1-201ENST00000507622 393 ntBASIC13.55□□□□□ -0.24
CGREF1Q99674 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.55□□□□□ -0.24
CGREF1Q99674 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 AL512310.5-201ENST00000551999 515 ntBASIC13.55□□□□□ -0.24
CGREF1Q99674 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.55□□□□□ -0.24
CGREF1Q99674 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.55□□□□□ -0.24
CGREF1Q99674 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 TP53TG3HP-202ENST00000569755 579 ntBASIC13.55□□□□□ -0.24
CGREF1Q99674 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CGREF1Q99674 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.55□□□□□ -0.24
CGREF1Q99674 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.55□□□□□ -0.24
CGREF1Q99674 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CGREF1Q99674 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CGREF1Q99674 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.55□□□□□ -0.24
CGREF1Q99674 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms