Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 AL391647.1-201ENST00000395664 511 ntBASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 AL136309.1-201ENST00000403917 691 ntBASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 CNN2P8-201ENST00000421872 913 ntBASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 KRT90P-201ENST00000549264 1064 ntBASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 MKRN5P-201ENST00000445263 1467 ntBASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 PER1-202ENST00000354903 3115 ntTSL 2 BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHAMP1Q96JM3 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 LINC00115-201ENST00000473798 1317 ntBASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 CYP4F23P-201ENST00000593402 1579 ntBASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 AC098614.1-201ENST00000368528 745 ntBASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 AK2P2-201ENST00000439142 405 ntBASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 AP006547.1-201ENST00000563435 692 ntBASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 AC132192.2-201ENST00000596206 1147 ntBASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 AL162274.1-201ENST00000617191 1098 ntBASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 PXK-210ENST00000479241 2817 ntTSL 2 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 LAP3P2-201ENST00000454686 1454 ntBASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CHAMP1Q96JM3 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHAMP1Q96JM3 NME1-209ENST00000511355 1645 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms