Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 MIR769-201ENST00000390225 118 ntBASIC12.46□□□□□ -0.41
TMEM54Q969K7 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 AC073150.1-201ENST00000450406 1084 ntBASIC12.46□□□□□ -0.41
TMEM54Q969K7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 SLC25A15P3-201ENST00000505530 290 ntBASIC12.46□□□□□ -0.41
TMEM54Q969K7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 AL161670.2-201ENST00000557650 1227 ntBASIC12.46□□□□□ -0.41
TMEM54Q969K7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 PHBP15-201ENST00000574228 665 ntBASIC12.46□□□□□ -0.41
TMEM54Q969K7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 LINC01783-202ENST00000614408 828 ntBASIC12.46□□□□□ -0.41
TMEM54Q969K7 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 BX284668.2-205ENST00000619677 828 ntBASIC12.46□□□□□ -0.41
TMEM54Q969K7 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM54Q969K7 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
TMEM54Q969K7 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.46□□□□□ -0.42
TMEM54Q969K7 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.46□□□□□ -0.42
TMEM54Q969K7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM54Q969K7 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM54Q969K7 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.46□□□□□ -0.42
TMEM54Q969K7 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.46□□□□□ -0.42
TMEM54Q969K7 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM54Q969K7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.46□□□□□ -0.42
TMEM54Q969K7 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.46□□□□□ -0.42
TMEM54Q969K7 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.46□□□□□ -0.42
TMEM54Q969K7 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM54Q969K7 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
TMEM54Q969K7 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 AC008132.1-202ENST00000342005 1389 ntBASIC12.45□□□□□ -0.42
TMEM54Q969K7 AC093462.1-201ENST00000621167 1683 ntBASIC12.45□□□□□ -0.42
TMEM54Q969K7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 ABCD1P2-201ENST00000429313 1601 ntBASIC12.45□□□□□ -0.42
TMEM54Q969K7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 SNORA50C-201ENST00000408535 133 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms