Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.22□□□□□ -0.29
HPS1Q92902 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.21□□□□□ -0.29
HPS1Q92902 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.21□□□□□ -0.29
HPS1Q92902 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
HPS1Q92902 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
HPS1Q92902 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
HPS1Q92902 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
HPS1Q92902 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.21□□□□□ -0.29
HPS1Q92902 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
HPS1Q92902 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.21□□□□□ -0.29
HPS1Q92902 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HPS1Q92902 AP000845.1-201ENST00000581677 2131 ntBASIC13.21□□□□□ -0.29
HPS1Q92902 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.21□□□□□ -0.29
HPS1Q92902 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HPS1Q92902 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 FP325330.2-201ENST00000624219 5630 ntBASIC13.21□□□□□ -0.29
HPS1Q92902 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 RPL5P21-201ENST00000404620 815 ntBASIC13.21□□□□□ -0.29
HPS1Q92902 MIR1909-201ENST00000411312 80 ntBASIC13.21□□□□□ -0.29
HPS1Q92902 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.21□□□□□ -0.29
HPS1Q92902 AC098850.1-201ENST00000419919 790 ntBASIC13.21□□□□□ -0.29
HPS1Q92902 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 AL162726.2-201ENST00000438986 1017 ntBASIC13.21□□□□□ -0.29
HPS1Q92902 RPS2P32-201ENST00000439199 892 ntBASIC13.21□□□□□ -0.29
HPS1Q92902 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.21□□□□□ -0.29
HPS1Q92902 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.21□□□□□ -0.29
HPS1Q92902 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.21□□□□□ -0.29
HPS1Q92902 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.21□□□□□ -0.29
HPS1Q92902 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC13.21□□□□□ -0.29
HPS1Q92902 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.21□□□□□ -0.29
HPS1Q92902 AP005482.1-201ENST00000563722 1273 ntBASIC13.21□□□□□ -0.29
HPS1Q92902 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.21□□□□□ -0.29
HPS1Q92902 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC13.21□□□□□ -0.29
HPS1Q92902 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.21□□□□□ -0.29
HPS1Q92902 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.21□□□□□ -0.29
HPS1Q92902 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.21□□□□□ -0.29
HPS1Q92902 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
HPS1Q92902 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.21□□□□□ -0.29
HPS1Q92902 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.21□□□□□ -0.29
HPS1Q92902 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HPS1Q92902 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HPS1Q92902 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HPS1Q92902 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.21□□□□□ -0.3
HPS1Q92902 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.21□□□□□ -0.3
HPS1Q92902 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HPS1Q92902 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HPS1Q92902 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HPS1Q92902 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HPS1Q92902 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
HPS1Q92902 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
HPS1Q92902 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HPS1Q92902 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
HPS1Q92902 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 CASC19-229ENST00000641418 1373 ntBASIC13.2□□□□□ -0.3
HPS1Q92902 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 AC090505.1-201ENST00000430515 1834 ntBASIC13.2□□□□□ -0.3
HPS1Q92902 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.2□□□□□ -0.3
HPS1Q92902 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.2□□□□□ -0.3
HPS1Q92902 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.2□□□□□ -0.3
HPS1Q92902 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC13.2□□□□□ -0.3
HPS1Q92902 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HPS1Q92902 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HPS1Q92902 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
HPS1Q92902 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HPS1Q92902 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
HPS1Q92902 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HPS1Q92902 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.2□□□□□ -0.3
HPS1Q92902 MIR658-201ENST00000385210 100 ntBASIC13.2□□□□□ -0.3
HPS1Q92902 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms