RNA–Protein interactions for RNA: ENST00000310564.10

COA1-202, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COA1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-202ENST00000310564 AEBP2Q6ZN18 517 aaPredicted RBP35.31■■■■□ 3.24
COA1-202ENST00000310564 CHIC1Q5VXU3 224 aa34.06■■■■□ 3.04
COA1-202ENST00000310564 PHF23Q9BUL5 403 aaPredicted RBP30■■■□□ 2.39
COA1-202ENST00000310564 SENP3Q9H4L4 574 aaPredicted RBP29.9■■■□□ 2.38
COA1-202ENST00000310564 FOXD1Q16676 465 aa27.9■■■□□ 2.06
COA1-202ENST00000310564 PLPPR3Q6T4P5 718 aa27.5■■□□□ 1.99
COA1-202ENST00000310564 ADRA2BP18089 450 aa26.65■■□□□ 1.86
COA1-202ENST00000310564 PPP6R1Q9UPN7 881 aa26.65■■□□□ 1.86
COA1-202ENST00000310564 PIAS4Q8N2W9 510 aaPredicted RBP26.27■■□□□ 1.8
COA1-202ENST00000310564 MSH5O43196 834 aa25.72■■□□□ 1.71
COA1-202ENST00000310564 MAPK8IP2Q13387 824 aaPredicted RBP24.31■■□□□ 1.48
COA1-202ENST00000310564 NISCHQ9Y2I1 1504 aa24.28■■□□□ 1.48
COA1-202ENST00000310564 PPP4R3CPQ6ZMV5 832 aa24.27■■□□□ 1.48
COA1-202ENST00000310564 SCAF1Q9H7N4 1312 aaKnown RBP24.18■■□□□ 1.46
COA1-202ENST00000310564 POTEDQ86YR6 584 aa24.14■■□□□ 1.45
COA1-202ENST00000310564 DMRT2Q9Y5R5 561 aa23.82■■□□□ 1.4
COA1-202ENST00000310564 CNKSR2Q8WXI2 1034 aa23.58■■□□□ 1.37
COA1-202ENST00000310564 NCBP3Q53F19 620 aaKnown RBP23.46■■□□□ 1.35
COA1-202ENST00000310564 KCNA4P22459 653 aa23.4■■□□□ 1.34
COA1-202ENST00000310564 NPM3O75607 178 aaKnown RBP23.19■■□□□ 1.3
COA1-202ENST00000310564 RNF216Q9NWF9 866 aaPredicted RBP23.17■■□□□ 1.3
COA1-202ENST00000310564 HOXD11P31277 338 aaPredicted RBP23.14■■□□□ 1.29
COA1-202ENST00000310564 DCAF8L1A6NGE4 600 aa23.09■■□□□ 1.29
COA1-202ENST00000310564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.24■■□□□ 1.156e-13■■□□□ 11.6
COA1-202ENST00000310564 DNAJC5BQ9UF47 199 aa22.2■■□□□ 1.14
COA1-202ENST00000310564 SLC4A1APQ9BWU0 796 aaKnown RBP22.19■■□□□ 1.14
COA1-202ENST00000310564 RNF39Q9H2S5 420 aa22.05■■□□□ 1.12
COA1-202ENST00000310564 SLC4A2P04920 1241 aa21.98■■□□□ 1.11
COA1-202ENST00000310564 CACNB1Q02641 598 aaPredicted RBP21.85■■□□□ 1.09
COA1-202ENST00000310564 U3KPZ7 1027 aaPredicted RBP21.77■■□□□ 1.08
COA1-202ENST00000310564 C1QBPQ07021 282 aaKnown RBP21.72■■□□□ 1.07
COA1-202ENST00000310564 CCDC180Q9P1Z9 1646 aa21.61■■□□□ 1.05
COA1-202ENST00000310564 ZBTB22O15209 634 aa21.52■■□□□ 1.04
COA1-202ENST00000310564 FOXD4L1Q9NU39 408 aa21.52■■□□□ 1.04
COA1-202ENST00000310564 MYCNP04198 464 aaPredicted RBP21.37■■□□□ 1.01
COA1-202ENST00000310564 SPINK5Q9NQ38 1064 aaPredicted RBP21.37■■□□□ 1.01
COA1-202ENST00000310564 EHMT2Q96KQ7 1210 aa21.35■■□□□ 1.01
COA1-202ENST00000310564 CAPN15O75808 1086 aa21.31■■□□□ 1
COA1-202ENST00000310564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.26■□□□□ 0.99
COA1-202ENST00000310564 HNRNPUL2Q1KMD3 747 aaKnown RBP21.26■□□□□ 0.99
COA1-202ENST00000310564 SAMD1Q6SPF0 538 aaPredicted RBP21.21■□□□□ 0.99
COA1-202ENST00000310564 TRHP20396 242 aaPredicted RBP21.16■□□□□ 0.98
COA1-202ENST00000310564 APLP2Q06481 763 aa21.1■□□□□ 0.97
COA1-202ENST00000310564 CSRNP3Q8WYN3 585 aa21.09■□□□□ 0.97
COA1-202ENST00000310564 ATF5Q9Y2D1 282 aaPredicted RBP20.98■□□□□ 0.95
COA1-202ENST00000310564 ABCB7O75027 752 aa20.94■□□□□ 0.94
COA1-202ENST00000310564 ZNF219Q9P2Y4 722 aaPredicted RBP20.93■□□□□ 0.94
COA1-202ENST00000310564 DSG3P32926 999 aa20.91■□□□□ 0.94
COA1-202ENST00000310564 POLA2Q14181 598 aa20.68■□□□□ 0.9
COA1-202ENST00000310564 ATXN8OSP0DMR3 200 aa20.66■□□□□ 0.9
COA1-202ENST00000310564 ABCC9O60706 1549 aa20.55■□□□□ 0.88
COA1-202ENST00000310564 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.85
COA1-202ENST00000310564 MYO15BQ96JP2 1530 aa20.25■□□□□ 0.83
COA1-202ENST00000310564 DCAF1Q9Y4B6 1507 aa20.25■□□□□ 0.83
COA1-202ENST00000310564 NACADO15069 1562 aa20.18■□□□□ 0.82
COA1-202ENST00000310564 ZBTB12Q9Y330 459 aaPredicted RBP20.12■□□□□ 0.81
COA1-202ENST00000310564 RB1CC1Q8TDY2 1594 aa20.12■□□□□ 0.81
COA1-202ENST00000310564 FBLN2P98095 1184 aa20.02■□□□□ 0.8
COA1-202ENST00000310564 OSCARQ8IYS5 282 aa20■□□□□ 0.79
COA1-202ENST00000310564 MKRN4PQ13434 485 aaPredicted RBP19.98■□□□□ 0.79
COA1-202ENST00000310564 DCAF8L2P0C7V8 631 aa19.89■□□□□ 0.77
COA1-202ENST00000310564 RBM42Q9BTD8 480 aaKnown RBP19.84■□□□□ 0.77
COA1-202ENST00000310564 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
COA1-202ENST00000310564 SPDYE2BA6NHP3 402 aa19.59■□□□□ 0.73
COA1-202ENST00000310564 SPDYE6P0CI01 402 aa19.59■□□□□ 0.73
COA1-202ENST00000310564 SPDYE2Q495Y8 402 aa19.59■□□□□ 0.73
COA1-202ENST00000310564 ZNF692Q9BU19 519 aaPredicted RBP19.59■□□□□ 0.73
COA1-202ENST00000310564 AKT1S1Q96B36 256 aa19.55■□□□□ 0.72
COA1-202ENST00000310564 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
COA1-202ENST00000310564 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
COA1-202ENST00000310564 REM2Q8IYK8 340 aaPredicted RBP19.46■□□□□ 0.71
COA1-202ENST00000310564 SPDYE4A6NLX3 237 aa19.39■□□□□ 0.69
COA1-202ENST00000310564 SSUH2Q9Y2M2 353 aa19.39■□□□□ 0.69
COA1-202ENST00000310564 BICRAQ9NZM4 1560 aa19.38■□□□□ 0.69
COA1-202ENST00000310564 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.69
COA1-202ENST00000310564 PITPNM1O00562 1244 aa19.27■□□□□ 0.68
COA1-202ENST00000310564 CHRDL2Q6WN34 429 aa19.26■□□□□ 0.67
COA1-202ENST00000310564 CLEC11AQ9Y240 323 aa19.26■□□□□ 0.67
COA1-202ENST00000310564 FKBP8Q14318 412 aa19.16■□□□□ 0.66
COA1-202ENST00000310564 SPDYE1Q8NFV5 336 aaPredicted RBP19.13■□□□□ 0.65
COA1-202ENST00000310564 POTEHQ6S545 545 aa19.04■□□□□ 0.64
COA1-202ENST00000310564 PIP4P2Q8N4L2 257 aa18.97■□□□□ 0.63
COA1-202ENST00000310564 PRR29P0C7W0 189 aa18.93■□□□□ 0.62
COA1-202ENST00000310564 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.61
COA1-202ENST00000310564 FXR2P51116 673 aaKnown RBP eCLIP18.87■□□□□ 0.61
COA1-202ENST00000310564 BAZ1AQ9NRL2 1556 aaPredicted RBP18.87■□□□□ 0.61
COA1-202ENST00000310564 PROM2Q8N271 834 aa18.83■□□□□ 0.6
COA1-202ENST00000310564 CHADLQ6NUI6 762 aa18.82■□□□□ 0.6
COA1-202ENST00000310564 PRKAR2AP13861 404 aaKnown RBP18.8■□□□□ 0.6
COA1-202ENST00000310564 SMARCA4P51532 1647 aa18.79■□□□□ 0.6
COA1-202ENST00000310564 STAG3Q9UJ98 1225 aa18.79■□□□□ 0.6
COA1-202ENST00000310564 CECR2Q9BXF3 1484 aa18.73■□□□□ 0.59
COA1-202ENST00000310564 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
COA1-202ENST00000310564 PEG3Q9GZU2 1588 aa18.68■□□□□ 0.58
COA1-202ENST00000310564 SMARCA2P51531 1590 aa18.68■□□□□ 0.58
COA1-202ENST00000310564 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.57
COA1-202ENST00000310564 CREBZFQ9NS37 354 aa18.57■□□□□ 0.56
COA1-202ENST00000310564 HMGXB3Q12766 1538 aa18.57■□□□□ 0.56
COA1-202ENST00000310564 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
COA1-202ENST00000310564 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms