Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMC1Q8TDI8 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC19.76■□□□□ 0.75
TMC1Q8TDI8 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TMC1Q8TDI8 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 Z69890.1-201ENST00000382990 339 ntBASIC19.75■□□□□ 0.75
TMC1Q8TDI8 MIR645-201ENST00000385283 94 ntBASIC19.75■□□□□ 0.75
TMC1Q8TDI8 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 POLD4-208ENST00000532830 904 ntTSL 3 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 MAX-218ENST00000557746 571 ntTSL 4 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 MT3-203ENST00000565838 421 ntTSL 3 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 API5-208ENST00000531273 1868 ntTSL 2 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 LINC00115-201ENST00000473798 1317 ntBASIC19.75■□□□□ 0.75
TMC1Q8TDI8 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 AC067931.2-201ENST00000623655 2003 ntBASIC19.75■□□□□ 0.75
TMC1Q8TDI8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TMC1Q8TDI8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 AC087392.5-201ENST00000612517 489 ntBASIC19.74■□□□□ 0.75
TMC1Q8TDI8 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 MIR6727-201ENST00000620702 65 ntBASIC19.74■□□□□ 0.75
TMC1Q8TDI8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 MST1P2-201ENST00000457982 2291 ntBASIC19.74■□□□□ 0.75
TMC1Q8TDI8 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 LINC01815-202ENST00000641468 1409 ntBASIC19.74■□□□□ 0.75
TMC1Q8TDI8 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMC1Q8TDI8 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMC1Q8TDI8 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TMC1Q8TDI8 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC19.73■□□□□ 0.75
TMC1Q8TDI8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMC1Q8TDI8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TMC1Q8TDI8 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMC1Q8TDI8 AL591122.2-201ENST00000624125 1853 ntBASIC19.73■□□□□ 0.75
TMC1Q8TDI8 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMC1Q8TDI8 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC19.73■□□□□ 0.75
TMC1Q8TDI8 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMC1Q8TDI8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms