Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 SHMT1P1-201ENST00000419974 1312 ntBASIC13.65□□□□□ -0.22
RNF44Q7L0R7 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 REXO1L1P-201ENST00000379010 6598 ntBASIC13.65□□□□□ -0.22
RNF44Q7L0R7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 BANF1P3-201ENST00000412556 261 ntBASIC13.65□□□□□ -0.22
RNF44Q7L0R7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 IMP3P2-201ENST00000489760 475 ntBASIC13.65□□□□□ -0.22
RNF44Q7L0R7 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RNF44Q7L0R7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
RNF44Q7L0R7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
RNF44Q7L0R7 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
RNF44Q7L0R7 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
RNF44Q7L0R7 LINC00115-201ENST00000473798 1317 ntBASIC13.64□□□□□ -0.23
RNF44Q7L0R7 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 RPSAP15-201ENST00000448168 861 ntBASIC13.64□□□□□ -0.23
RNF44Q7L0R7 UPF3AP2-201ENST00000457924 1132 ntBASIC13.64□□□□□ -0.23
RNF44Q7L0R7 AC008723.1-201ENST00000506922 207 ntBASIC13.64□□□□□ -0.23
RNF44Q7L0R7 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 AC026803.1-201ENST00000569130 274 ntBASIC13.64□□□□□ -0.23
RNF44Q7L0R7 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 AC079336.7-201ENST00000623428 1078 ntBASIC13.64□□□□□ -0.23
RNF44Q7L0R7 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.64□□□□□ -0.23
RNF44Q7L0R7 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms