Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 AC108724.1-201ENST00000481669 352 ntBASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 KRT18P8-201ENST00000581937 1246 ntBASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 IFNL3P1-201ENST00000595082 501 ntBASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42BPAQ5VT25 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 AC002350.2-201ENST00000623894 1828 ntBASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 POP5-201ENST00000341039 913 ntTSL 2 BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 SNRPCP15-201ENST00000424055 192 ntBASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 AC027601.5-201ENST00000624065 2482 ntBASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 AL008638.4-201ENST00000624792 1315 ntBASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 GBAP1-208ENST00000566701 1546 ntBASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42BPAQ5VT25 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 RFNG-202ENST00000429557 994 ntTSL 5 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 AC005865.2-202ENST00000635814 725 ntBASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 SFPQP1-201ENST00000446621 1786 ntBASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42BPAQ5VT25 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms