Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.69□□□□□ -0.22
RFTN2Q52LD8 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 AL391647.1-201ENST00000395664 511 ntBASIC13.69□□□□□ -0.22
RFTN2Q52LD8 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 AC012441.2-201ENST00000444843 739 ntBASIC13.69□□□□□ -0.22
RFTN2Q52LD8 KRT17P7-201ENST00000451704 1104 ntBASIC13.69□□□□□ -0.22
RFTN2Q52LD8 CTBP2P5-201ENST00000454986 1264 ntBASIC13.69□□□□□ -0.22
RFTN2Q52LD8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 AC079316.1-201ENST00000548397 411 ntBASIC13.69□□□□□ -0.22
RFTN2Q52LD8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 AC100827.2-201ENST00000563214 1194 ntBASIC13.69□□□□□ -0.22
RFTN2Q52LD8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 AL591471.1-201ENST00000621855 229 ntBASIC13.69□□□□□ -0.22
RFTN2Q52LD8 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RFTN2Q52LD8 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 AL359845.1-201ENST00000458202 1648 ntBASIC13.68□□□□□ -0.22
RFTN2Q52LD8 RCC2P1-201ENST00000452257 1476 ntBASIC13.68□□□□□ -0.22
RFTN2Q52LD8 AC061965.1-201ENST00000560524 1465 ntBASIC13.68□□□□□ -0.22
RFTN2Q52LD8 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 AC103592.1-201ENST00000394513 664 ntBASIC13.68□□□□□ -0.22
RFTN2Q52LD8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 FAM58BP-201ENST00000439056 645 ntBASIC13.68□□□□□ -0.22
RFTN2Q52LD8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 KLF2P4-201ENST00000451959 1225 ntBASIC13.68□□□□□ -0.22
RFTN2Q52LD8 AC006122.1-201ENST00000493323 440 ntBASIC13.68□□□□□ -0.22
RFTN2Q52LD8 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 PGAM1P5-201ENST00000548011 764 ntBASIC13.68□□□□□ -0.22
RFTN2Q52LD8 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 AC244157.2-201ENST00000616239 1006 ntBASIC13.68□□□□□ -0.22
RFTN2Q52LD8 AC004623.1-201ENST00000624592 2127 ntBASIC13.68□□□□□ -0.22
RFTN2Q52LD8 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
RFTN2Q52LD8 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms