Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.49■□□□□ 0.23
CERKLQ49MI3 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 BX640514.1-201ENST00000583223 1918 ntBASIC16.49■□□□□ 0.23
CERKLQ49MI3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 AL031673.1-201ENST00000611460 466 ntBASIC16.49■□□□□ 0.23
CERKLQ49MI3 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 AL451007.2-201ENST00000632004 563 ntBASIC16.49■□□□□ 0.23
CERKLQ49MI3 LINC02486-201ENST00000604157 3000 ntBASIC16.49■□□□□ 0.23
CERKLQ49MI3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CERKLQ49MI3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CERKLQ49MI3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 OR7E115P-201ENST00000382617 1024 ntBASIC16.48■□□□□ 0.23
CERKLQ49MI3 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 AC006529.1-201ENST00000459978 637 ntBASIC16.48■□□□□ 0.23
CERKLQ49MI3 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 AC093826.1-201ENST00000508655 993 ntBASIC16.48■□□□□ 0.23
CERKLQ49MI3 AC100858.1-201ENST00000514059 1228 ntBASIC16.48■□□□□ 0.23
CERKLQ49MI3 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 AC011471.3-201ENST00000623576 402 ntBASIC16.48■□□□□ 0.23
CERKLQ49MI3 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CERKLQ49MI3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.48■□□□□ 0.23
CERKLQ49MI3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms