Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 SEC14L2-214ENST00000615189 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 ZNF461-204ENST00000588268 2584 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 LINC01254-202ENST00000567609 1907 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 TLE1P1-201ENST00000422965 589 ntBASIC10.61□□□□□ -0.71
HIST1H2BDP58876 AC007969.1-201ENST00000433675 447 ntBASIC10.61□□□□□ -0.71
HIST1H2BDP58876 TSPY15P-201ENST00000457163 923 ntBASIC10.61□□□□□ -0.71
HIST1H2BDP58876 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 AC104506.1-201ENST00000609247 429 ntBASIC10.61□□□□□ -0.71
HIST1H2BDP58876 AL732292.2-201ENST00000609649 430 ntBASIC10.61□□□□□ -0.71
HIST1H2BDP58876 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 CEP63-204ENST00000383229 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 LINC02052-202ENST00000427914 2285 ntTSL 2 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 IVD-203ENST00000479013 4251 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 LINC01634-201ENST00000443243 2379 ntTSL 2 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 C1S-221ENST00000617865 2844 ntTSL 5 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 TP53-208ENST00000504290 2331 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 TP53-220ENST00000610623 2331 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 AC008609.1-202ENST00000501818 2686 ntTSL 2 BASIC10.61□□□□□ -0.71
HIST1H2BDP58876 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 LILRB1-208ENST00000427581 2751 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 TTLL13P-206ENST00000641754 2256 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 CPT1B-204ENST00000405237 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 LINC01141-203ENST00000426428 2993 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 FP565324.1-201ENST00000636427 3659 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 PARL-206ENST00000435888 1098 ntTSL 5 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 AC140658.5-201ENST00000438532 169 ntBASIC10.6□□□□□ -0.71
HIST1H2BDP58876 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 ETFA-208ENST00000559602 792 ntTSL 3 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 AC025062.2-201ENST00000605477 670 ntBASIC10.6□□□□□ -0.71
HIST1H2BDP58876 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
HIST1H2BDP58876 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms