Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC10.59□□□□□ -0.71
CMC4P56277 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC10.59□□□□□ -0.71
CMC4P56277 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
CMC4P56277 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
CMC4P56277 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC10.59□□□□□ -0.71
CMC4P56277 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CMC4P56277 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC10.58□□□□□ -0.72
CMC4P56277 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
CMC4P56277 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CMC4P56277 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 AC016397.2-201ENST00000624848 1985 ntBASIC10.58□□□□□ -0.72
CMC4P56277 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
CMC4P56277 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC10.58□□□□□ -0.72
CMC4P56277 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 AC008132.1-202ENST00000342005 1389 ntBASIC10.58□□□□□ -0.72
CMC4P56277 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CMC4P56277 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
CMC4P56277 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC10.58□□□□□ -0.72
CMC4P56277 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC10.58□□□□□ -0.72
CMC4P56277 AC073869.2-201ENST00000417338 1026 ntBASIC10.58□□□□□ -0.72
CMC4P56277 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC10.58□□□□□ -0.72
CMC4P56277 RPS9P1-201ENST00000419943 583 ntBASIC10.58□□□□□ -0.72
CMC4P56277 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC10.58□□□□□ -0.72
CMC4P56277 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC10.58□□□□□ -0.72
CMC4P56277 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC10.58□□□□□ -0.72
CMC4P56277 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC10.58□□□□□ -0.72
CMC4P56277 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC10.58□□□□□ -0.72
CMC4P56277 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC10.58□□□□□ -0.72
CMC4P56277 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC10.58□□□□□ -0.72
CMC4P56277 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 AC020922.3-201ENST00000595064 547 ntBASIC10.58□□□□□ -0.72
CMC4P56277 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 AC091812.3-201ENST00000621362 345 ntBASIC10.58□□□□□ -0.72
CMC4P56277 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC10.58□□□□□ -0.72
CMC4P56277 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
CMC4P56277 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CMC4P56277 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
CMC4P56277 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC10.58□□□□□ -0.72
CMC4P56277 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC10.58□□□□□ -0.72
CMC4P56277 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC10.58□□□□□ -0.72
CMC4P56277 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
CMC4P56277 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC10.58□□□□□ -0.72
CMC4P56277 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 GRK6P1-201ENST00000400595 1711 ntBASIC10.58□□□□□ -0.72
CMC4P56277 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 GSN-203ENST00000373808 2664 ntTSL 2 BASIC10.58□□□□□ -0.72
CMC4P56277 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
CMC4P56277 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CMC4P56277 LINC00115-201ENST00000473798 1317 ntBASIC10.58□□□□□ -0.72
CMC4P56277 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
CMC4P56277 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
CMC4P56277 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CMC4P56277 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CMC4P56277 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC10.57□□□□□ -0.72
CMC4P56277 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CMC4P56277 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms