Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
PSMD4P55036 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.3□□□□□ -0.28
PSMD4P55036 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.3□□□□□ -0.28
PSMD4P55036 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.3□□□□□ -0.28
PSMD4P55036 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
PSMD4P55036 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
PSMD4P55036 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PSMD4P55036 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PSMD4P55036 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.3□□□□□ -0.28
PSMD4P55036 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
PSMD4P55036 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.3□□□□□ -0.28
PSMD4P55036 DPM3-202ENST00000368399 517 ntBASIC13.3□□□□□ -0.28
PSMD4P55036 MIR1908-201ENST00000410394 80 ntBASIC13.3□□□□□ -0.28
PSMD4P55036 KRT18P36-201ENST00000411618 1276 ntBASIC13.3□□□□□ -0.28
PSMD4P55036 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.3□□□□□ -0.28
PSMD4P55036 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.3□□□□□ -0.28
PSMD4P55036 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.3□□□□□ -0.28
PSMD4P55036 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.3□□□□□ -0.28
PSMD4P55036 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.3□□□□□ -0.28
PSMD4P55036 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.3□□□□□ -0.28
PSMD4P55036 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.3□□□□□ -0.28
PSMD4P55036 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PSMD4P55036 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.3□□□□□ -0.28
PSMD4P55036 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.3□□□□□ -0.28
PSMD4P55036 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.3□□□□□ -0.28
PSMD4P55036 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PSMD4P55036 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.3□□□□□ -0.28
PSMD4P55036 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.3□□□□□ -0.28
PSMD4P55036 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.3□□□□□ -0.28
PSMD4P55036 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
PSMD4P55036 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PSMD4P55036 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PSMD4P55036 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.29□□□□□ -0.28
PSMD4P55036 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PSMD4P55036 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.29□□□□□ -0.28
PSMD4P55036 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PSMD4P55036 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PSMD4P55036 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 CICP16-201ENST00000502609 2813 ntBASIC13.29□□□□□ -0.28
PSMD4P55036 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
PSMD4P55036 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.29□□□□□ -0.28
PSMD4P55036 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.29□□□□□ -0.28
PSMD4P55036 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.29□□□□□ -0.28
PSMD4P55036 AL512310.5-201ENST00000551999 515 ntBASIC13.29□□□□□ -0.28
PSMD4P55036 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.29□□□□□ -0.28
PSMD4P55036 AL132994.2-201ENST00000603120 687 ntBASIC13.29□□□□□ -0.28
PSMD4P55036 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PSMD4P55036 AL590824.1-201ENST00000403828 1349 ntBASIC13.29□□□□□ -0.28
PSMD4P55036 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
PSMD4P55036 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PSMD4P55036 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms