Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RFC1P35251 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.02□□□□□ -0.01
RFC1P35251 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFC1P35251 AL365181.3-201ENST00000605886 3222 ntBASIC15.02□□□□□ -0.01
RFC1P35251 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RFC1P35251 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.01□□□□□ -0.01
RFC1P35251 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RFC1P35251 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RFC1P35251 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.01□□□□□ -0.01
RFC1P35251 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC1P35251 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RFC1P35251 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RFC1P35251 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RFC1P35251 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC1P35251 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC1P35251 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RFC1P35251 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.01□□□□□ -0.01
RFC1P35251 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.01□□□□□ -0.01
RFC1P35251 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC1P35251 AC044849.1-201ENST00000519737 1188 ntBASIC15.01□□□□□ -0.01
RFC1P35251 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.01□□□□□ -0.01
RFC1P35251 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RFC1P35251 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.01□□□□□ -0.01
RFC1P35251 AL132994.2-201ENST00000603120 687 ntBASIC15.01□□□□□ -0.01
RFC1P35251 AL136295.7-201ENST00000619226 1200 ntBASIC15.01□□□□□ -0.01
RFC1P35251 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RFC1P35251 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC1P35251 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RFC1P35251 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC1P35251 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.01□□□□□ -0.01
RFC1P35251 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RFC1P35251 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFC1P35251 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.01□□□□□ -0.01
RFC1P35251 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15□□□□□ -0.01
RFC1P35251 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFC1P35251 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15□□□□□ -0.01
RFC1P35251 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFC1P35251 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RFC1P35251 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15□□□□□ -0.01
RFC1P35251 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15□□□□□ -0.01
RFC1P35251 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15□□□□□ -0.01
RFC1P35251 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFC1P35251 LINC00115-201ENST00000473798 1317 ntBASIC15□□□□□ -0.01
RFC1P35251 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFC1P35251 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFC1P35251 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15□□□□□ -0.01
RFC1P35251 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RFC1P35251 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15□□□□□ -0.01
RFC1P35251 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RFC1P35251 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFC1P35251 NKAIN1P1-201ENST00000435754 582 ntBASIC15□□□□□ -0.01
RFC1P35251 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15□□□□□ -0.01
RFC1P35251 AC108725.1-201ENST00000495472 409 ntBASIC15□□□□□ -0.01
RFC1P35251 AC106794.1-201ENST00000506935 792 ntBASIC15□□□□□ -0.01
RFC1P35251 AC005740.2-201ENST00000511085 419 ntBASIC15□□□□□ -0.01
RFC1P35251 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15□□□□□ -0.01
RFC1P35251 AC013355.1-201ENST00000562625 723 ntBASIC15□□□□□ -0.01
RFC1P35251 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFC1P35251 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15□□□□□ -0.01
RFC1P35251 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15□□□□□ -0.01
RFC1P35251 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
RFC1P35251 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15□□□□□ -0.01
RFC1P35251 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RFC1P35251 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFC1P35251 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RFC1P35251 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15□□□□□ -0.01
RFC1P35251 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15□□□□□ -0.01
RFC1P35251 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFC1P35251 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RFC1P35251 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RFC1P35251 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15□□□□□ -0.01
RFC1P35251 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15□□□□□ -0.01
RFC1P35251 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RFC1P35251 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFC1P35251 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFC1P35251 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RFC1P35251 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15□□□□□ -0.01
RFC1P35251 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15□□□□□ -0.01
RFC1P35251 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15□□□□□ -0.01
RFC1P35251 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RFC1P35251 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RFC1P35251 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms