Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC16.02■□□□□ 0.15
TPM3P06753 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.02■□□□□ 0.15
TPM3P06753 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.02■□□□□ 0.15
TPM3P06753 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TPM3P06753 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TPM3P06753 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.01■□□□□ 0.15
TPM3P06753 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
TPM3P06753 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TPM3P06753 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC16.01■□□□□ 0.15
TPM3P06753 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.01■□□□□ 0.15
TPM3P06753 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.01■□□□□ 0.15
TPM3P06753 AC068587.3-201ENST00000526613 355 ntBASIC16.01■□□□□ 0.15
TPM3P06753 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.01■□□□□ 0.15
TPM3P06753 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.01■□□□□ 0.15
TPM3P06753 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.01■□□□□ 0.15
TPM3P06753 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.01■□□□□ 0.15
TPM3P06753 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TPM3P06753 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TPM3P06753 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TPM3P06753 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16■□□□□ 0.15
TPM3P06753 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TPM3P06753 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TPM3P06753 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TPM3P06753 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TPM3P06753 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16■□□□□ 0.15
TPM3P06753 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16■□□□□ 0.15
TPM3P06753 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16■□□□□ 0.15
TPM3P06753 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC16■□□□□ 0.15
TPM3P06753 CR392039.2-201ENST00000623182 509 ntBASIC16■□□□□ 0.15
TPM3P06753 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16■□□□□ 0.15
TPM3P06753 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC16■□□□□ 0.15
TPM3P06753 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC16■□□□□ 0.15
TPM3P06753 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC16■□□□□ 0.15
TPM3P06753 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC16■□□□□ 0.15
TPM3P06753 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TPM3P06753 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 KRT8P28-201ENST00000433288 1390 ntBASIC16■□□□□ 0.15
TPM3P06753 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TPM3P06753 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TPM3P06753 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TPM3P06753 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 AC073862.5-201ENST00000624129 2027 ntBASIC15.99■□□□□ 0.15
TPM3P06753 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TPM3P06753 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM3P06753 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC15.99■□□□□ 0.15
TPM3P06753 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM3P06753 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TPM3P06753 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 MYCLP2-201ENST00000449268 967 ntBASIC15.99■□□□□ 0.15
TPM3P06753 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 AC022137.2-201ENST00000503482 481 ntBASIC15.99■□□□□ 0.15
TPM3P06753 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms