Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 AL512430.1-201ENST00000392575 860 ntBASIC12.98□□□□□ -0.33
P04436 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 BX679664.3-201ENST00000414070 555 ntBASIC12.98□□□□□ -0.33
P04436 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.98□□□□□ -0.33
P04436 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.98□□□□□ -0.33
P04436 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.98□□□□□ -0.33
P04436 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.98□□□□□ -0.33
P04436 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
P04436 AC113935.1-201ENST00000471722 555 ntBASIC12.98□□□□□ -0.33
P04436 RN7SL81P-201ENST00000493781 261 ntBASIC12.98□□□□□ -0.33
P04436 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.98□□□□□ -0.33
P04436 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC12.98□□□□□ -0.33
P04436 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
P04436 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 CFL1-214ENST00000534769 758 ntTSL 2 BASIC12.98□□□□□ -0.33
P04436 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.98□□□□□ -0.33
P04436 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.98□□□□□ -0.33
P04436 MIR4522-201ENST00000584932 87 ntBASIC12.98□□□□□ -0.33
P04436 AL133467.4-201ENST00000602953 725 ntBASIC12.98□□□□□ -0.33
P04436 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.98□□□□□ -0.33
P04436 AL021707.6-201ENST00000609212 491 ntBASIC12.98□□□□□ -0.33
P04436 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.98□□□□□ -0.33
P04436 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.98□□□□□ -0.33
P04436 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.98□□□□□ -0.33
P04436 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
P04436 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
P04436 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
P04436 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
P04436 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
P04436 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
P04436 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P04436 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.98□□□□□ -0.33
P04436 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.98□□□□□ -0.33
P04436 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.98□□□□□ -0.33
P04436 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.98□□□□□ -0.33
P04436 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
P04436 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.98□□□□□ -0.33
P04436 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.97□□□□□ -0.33
P04436 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.97□□□□□ -0.33
P04436 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.97□□□□□ -0.33
P04436 AC005912.2-201ENST00000619492 2400 ntBASIC12.97□□□□□ -0.33
P04436 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
P04436 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.97□□□□□ -0.33
P04436 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC12.97□□□□□ -0.33
P04436 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 AC098934.1-203ENST00000442868 1262 ntBASIC12.97□□□□□ -0.33
P04436 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.97□□□□□ -0.33
P04436 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.97□□□□□ -0.33
P04436 AC005740.1-201ENST00000515639 522 ntBASIC12.97□□□□□ -0.33
P04436 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.97□□□□□ -0.33
P04436 NDUFB10P1-201ENST00000567319 521 ntBASIC12.97□□□□□ -0.33
P04436 RN7SL665P-201ENST00000578793 300 ntBASIC12.97□□□□□ -0.33
P04436 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
P04436 SIGLEC22P-201ENST00000599104 714 ntBASIC12.97□□□□□ -0.33
P04436 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.97□□□□□ -0.33
P04436 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
P04436 AL805961.1-201ENST00000642026 753 ntBASIC12.97□□□□□ -0.33
P04436 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
P04436 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.97□□□□□ -0.33
P04436 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.97□□□□□ -0.33
P04436 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.97□□□□□ -0.33
P04436 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P04436 FP325330.2-201ENST00000624219 5630 ntBASIC12.97□□□□□ -0.33
P04436 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
P04436 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P04436 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P04436 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms