Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 MSNP1-201ENST00000511640 1732 ntBASIC12.53□□□□□ -0.4
NPIPB4C9JG80 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 MKRN5P-201ENST00000445263 1467 ntBASIC12.53□□□□□ -0.4
NPIPB4C9JG80 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPB4C9JG80 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 AC005252.3-201ENST00000623855 2258 ntBASIC12.52□□□□□ -0.41
NPIPB4C9JG80 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.52□□□□□ -0.41
NPIPB4C9JG80 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 ACTBP11-201ENST00000436287 1126 ntBASIC12.52□□□□□ -0.41
NPIPB4C9JG80 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 SLC25A15P3-201ENST00000505530 290 ntBASIC12.52□□□□□ -0.41
NPIPB4C9JG80 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 FRMPD2B-201ENST00000431305 1347 ntBASIC12.52□□□□□ -0.41
NPIPB4C9JG80 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.52□□□□□ -0.41
NPIPB4C9JG80 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPB4C9JG80 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms