Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 RBPMS2P1-201ENST00000437762 623 ntBASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 AC104506.1-201ENST00000609247 429 ntBASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 AL158212.4-201ENST00000624062 1286 ntBASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 AC011481.3-201ENST00000623895 5594 ntBASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 AC026410.3-201ENST00000514280 936 ntBASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 AC010336.2-201ENST00000564226 506 ntBASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 AC051619.7-201ENST00000568314 623 ntBASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SEC22CQ9BRL7 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms