Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 AC008536.3-201ENST00000623282 1599 ntBASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 RNA5SP491-201ENST00000362936 118 ntBASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 OR7E155P-201ENST00000412208 1014 ntBASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 AL137244.1-201ENST00000422931 865 ntBASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 PGK1P2-201ENST00000431702 1214 ntBASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 KRT8P34-201ENST00000577607 1044 ntBASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CRAMP1Q96RY5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 AP001267.2-201ENST00000532619 2086 ntBASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 AC008620.2-201ENST00000510294 1569 ntBASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 AL136084.1-201ENST00000449172 318 ntBASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 SRP14-208ENST00000560773 468 ntTSL 3 BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 AC048382.6-201ENST00000621980 1223 ntBASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 CASP16P-204ENST00000635032 809 ntBASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CRAMP1Q96RY5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 AC012617.1-204ENST00000586340 2305 ntBASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 AC020910.6-201ENST00000623084 1459 ntBASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 GH1-203ENST00000351388 685 ntTSL 2 BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 AC015818.1-201ENST00000451011 244 ntBASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 AC011462.4-201ENST00000616866 449 ntBASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CRAMP1Q96RY5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CRAMP1Q96RY5 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CRAMP1Q96RY5 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CRAMP1Q96RY5 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms