Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.64■□□□□ 0.25
TRIM47Q96LD4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 AL354702.1-201ENST00000442006 1960 ntBASIC16.64■□□□□ 0.25
TRIM47Q96LD4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.63■□□□□ 0.25
TRIM47Q96LD4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 TPT1P11-201ENST00000458482 498 ntBASIC16.63■□□□□ 0.25
TRIM47Q96LD4 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 FAM86B3P-203ENST00000523992 854 ntBASIC16.63■□□□□ 0.25
TRIM47Q96LD4 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 AC055811.3-201ENST00000584952 686 ntBASIC16.63■□□□□ 0.25
TRIM47Q96LD4 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 AC018695.6-201ENST00000614011 534 ntBASIC16.63■□□□□ 0.25
TRIM47Q96LD4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 FAM90A21P-201ENST00000510875 1396 ntBASIC16.63■□□□□ 0.25
TRIM47Q96LD4 FAM90A15P-201ENST00000514465 1395 ntBASIC16.63■□□□□ 0.25
TRIM47Q96LD4 FAM90A6P-201ENST00000515148 1394 ntBASIC16.63■□□□□ 0.25
TRIM47Q96LD4 FAM90A16P-201ENST00000526662 1395 ntBASIC16.63■□□□□ 0.25
TRIM47Q96LD4 FAM90A9P-201ENST00000527940 1395 ntBASIC16.63■□□□□ 0.25
TRIM47Q96LD4 FAM90A5P-201ENST00000528738 1395 ntBASIC16.63■□□□□ 0.25
TRIM47Q96LD4 FAM90A14P-201ENST00000530386 1395 ntBASIC16.63■□□□□ 0.25
TRIM47Q96LD4 FAM90A13P-201ENST00000534703 1395 ntBASIC16.63■□□□□ 0.25
TRIM47Q96LD4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM47Q96LD4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 COX20P1-201ENST00000366529 357 ntBASIC16.62■□□□□ 0.25
TRIM47Q96LD4 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 ERP29P1-201ENST00000442902 706 ntBASIC16.62■□□□□ 0.25
TRIM47Q96LD4 RPL35P9-201ENST00000446059 350 ntBASIC16.62■□□□□ 0.25
TRIM47Q96LD4 PGAM1P12-201ENST00000505622 748 ntBASIC16.62■□□□□ 0.25
TRIM47Q96LD4 AC068867.1-201ENST00000559855 150 ntBASIC16.62■□□□□ 0.25
TRIM47Q96LD4 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 AC140113.1-201ENST00000603467 169 ntBASIC16.62■□□□□ 0.25
TRIM47Q96LD4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRIM47Q96LD4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms