Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.33□□□□□ -0.11
LYSMD3Q7Z3D4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
LYSMD3Q7Z3D4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LYSMD3Q7Z3D4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LYSMD3Q7Z3D4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
LYSMD3Q7Z3D4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LYSMD3Q7Z3D4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LYSMD3Q7Z3D4 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.33□□□□□ -0.11
LYSMD3Q7Z3D4 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 AC239868.1-201ENST00000369385 493 ntBASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 ISCA2P1-201ENST00000425548 448 ntBASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 RN7SL11P-201ENST00000471305 293 ntBASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.33□□□□□ -0.12
LYSMD3Q7Z3D4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 SLC25A24P2-201ENST00000415059 510 ntBASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 AC093752.3-201ENST00000567343 901 ntBASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 AC008132.1-202ENST00000342005 1389 ntBASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LYSMD3Q7Z3D4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms