Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD4Q5XG99 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 AC106827.1-201ENST00000366454 431 ntBASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 GULOP-201ENST00000454030 748 ntBASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 TBC1D3P6-201ENST00000505954 962 ntBASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 CSTP2-201ENST00000610599 398 ntBASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 GGNBP1-204ENST00000613113 887 ntBASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 AC126755.5-201ENST00000622756 267 ntBASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 PLS3-210ENST00000626746 216 ntTSL 4 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD4Q5XG99 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LYSMD4Q5XG99 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.77□□□□□ -0.2
LYSMD4Q5XG99 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LYSMD4Q5XG99 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
LYSMD4Q5XG99 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 USP17L6P-201ENST00000382470 1197 ntBASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 EEF1DP2-201ENST00000433698 843 ntBASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 NALT1-202ENST00000450304 437 ntTSL 3 BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 ALG1L7P-201ENST00000502317 768 ntBASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 AC092612.1-201ENST00000514501 998 ntBASIC13.77□□□□□ -0.21
LYSMD4Q5XG99 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms