Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 KRT8P29-201ENST00000420409 1371 ntBASIC14.05□□□□□ -0.16
CDKL1Q00532 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.05□□□□□ -0.16
CDKL1Q00532 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CDKL1Q00532 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CDKL1Q00532 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.05□□□□□ -0.16
CDKL1Q00532 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.05□□□□□ -0.16
CDKL1Q00532 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CDKL1Q00532 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKL1Q00532 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.05□□□□□ -0.16
CDKL1Q00532 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDKL1Q00532 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDKL1Q00532 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CDKL1Q00532 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDKL1Q00532 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CDKL1Q00532 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CDKL1Q00532 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CDKL1Q00532 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKL1Q00532 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.04□□□□□ -0.16
CDKL1Q00532 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 MIR663B-201ENST00000408361 115 ntBASIC14.04□□□□□ -0.16
CDKL1Q00532 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDKL1Q00532 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
CDKL1Q00532 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.04□□□□□ -0.16
CDKL1Q00532 PGAM1P5-201ENST00000548011 764 ntBASIC14.04□□□□□ -0.16
CDKL1Q00532 AC140658.4-201ENST00000561990 352 ntBASIC14.04□□□□□ -0.16
CDKL1Q00532 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKL1Q00532 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 PCDHB18P-202ENST00000526308 3197 ntBASIC14.04□□□□□ -0.16
CDKL1Q00532 AL157996.1-201ENST00000624684 2299 ntBASIC14.04□□□□□ -0.16
CDKL1Q00532 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.04□□□□□ -0.16
CDKL1Q00532 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKL1Q00532 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKL1Q00532 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKL1Q00532 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CDKL1Q00532 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CDKL1Q00532 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDKL1Q00532 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKL1Q00532 MIR658-201ENST00000385210 100 ntBASIC14.03□□□□□ -0.16
CDKL1Q00532 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CDKL1Q00532 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.03□□□□□ -0.16
CDKL1Q00532 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKL1Q00532 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKL1Q00532 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 IGHV3-71-201ENST00000523324 359 ntBASIC14.03□□□□□ -0.16
CDKL1Q00532 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.03□□□□□ -0.16
CDKL1Q00532 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKL1Q00532 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKL1Q00532 AL512310.5-201ENST00000551999 515 ntBASIC14.03□□□□□ -0.16
CDKL1Q00532 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.03□□□□□ -0.16
CDKL1Q00532 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
CDKL1Q00532 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKL1Q00532 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKL1Q00532 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.03□□□□□ -0.16
CDKL1Q00532 RN7SL560P-201ENST00000577943 264 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms